RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
SLC48A1-206ENST00000548498 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
SLC48A1-206ENST00000548498 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
SLC48A1-206ENST00000548498 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
SLC48A1-206ENST00000548498 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
SLC48A1-206ENST00000548498 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 TRAF5O00463 557 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 SCNN1DP51172 638 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 NBPF10Q6P3W6 841 aaKnown RBP12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 NBPF15Q8N660 670 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 ZNF652Q9Y2D9 606 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
SLC48A1-206ENST00000548498 RIC1Q4ADV7 1423 aa12.98□□□□□ -0.33
SLC48A1-206ENST00000548498 EPS15P42566 896 aa12.98□□□□□ -0.33
SLC48A1-206ENST00000548498 RGS19P49795 217 aa12.98□□□□□ -0.33
SLC48A1-206ENST00000548498 HLFQ16534 295 aa12.98□□□□□ -0.33
SLC48A1-206ENST00000548498 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
SLC48A1-206ENST00000548498 AOC2O75106 756 aa12.97□□□□□ -0.33
SLC48A1-206ENST00000548498 RALBP1Q15311 655 aa12.97□□□□□ -0.33
SLC48A1-206ENST00000548498 CST9Q5W186 159 aa12.97□□□□□ -0.33
SLC48A1-206ENST00000548498 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
SLC48A1-206ENST00000548498 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
SLC48A1-206ENST00000548498 PSMD1Q99460 953 aa12.97□□□□□ -0.33
SLC48A1-206ENST00000548498 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 ALDH1B1P30837 517 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 ECE1P42892 770 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 CRY2Q49AN0 593 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 TLL2Q9Y6L7 1015 aa12.96□□□□□ -0.33
SLC48A1-206ENST00000548498 LRRC37AA6NMS7 1700 aa12.96□□□□□ -0.34
SLC48A1-206ENST00000548498 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
SLC48A1-206ENST00000548498 EIF6P56537 245 aaKnown RBP12.95□□□□□ -0.34
SLC48A1-206ENST00000548498 BEGAINQ9BUH8 593 aa12.95□□□□□ -0.34
SLC48A1-206ENST00000548498 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
SLC48A1-206ENST00000548498 RGL2O15211 777 aa12.94□□□□□ -0.34
SLC48A1-206ENST00000548498 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
SLC48A1-206ENST00000548498 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
SLC48A1-206ENST00000548498 MCM10Q7L590 875 aa12.94□□□□□ -0.34
SLC48A1-206ENST00000548498 LARGE2Q8N3Y3 721 aa12.94□□□□□ -0.34
SLC48A1-206ENST00000548498 MCOLN1Q9GZU1 580 aa12.94□□□□□ -0.34
SLC48A1-206ENST00000548498 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
SLC48A1-206ENST00000548498 UBN2Q6ZU65 1347 aa12.92□□□□□ -0.34
SLC48A1-206ENST00000548498 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
SLC48A1-206ENST00000548498 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
SLC48A1-206ENST00000548498 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
SLC48A1-206ENST00000548498 SAPCD2Q86UD0 394 aa12.92□□□□□ -0.34
SLC48A1-206ENST00000548498 IBTKQ9P2D0 1353 aaPredicted RBP12.92□□□□□ -0.34
SLC48A1-206ENST00000548498 TCERG1O14776 1098 aaKnown RBP12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 MAP2K2P36507 400 aa12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 GLIS2Q9BZE0 524 aaPredicted RBP12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
SLC48A1-206ENST00000548498 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 CELF2O95319 508 aaKnown RBP12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 GPTP24298 496 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 AOC3Q16853 763 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 NIM1KQ8IY84 436 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 SCN9AQ15858 1988 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 PSME4Q14997 1843 aa12.9□□□□□ -0.34
SLC48A1-206ENST00000548498 MAP3K15Q6ZN16 1313 aa12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 PPIP5K2O43314 1243 aa12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 DGKZQ13574 1117 aa12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
SLC48A1-206ENST00000548498 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 CA12O43570 354 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 CXCL9Q07325 125 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 ZIC5Q96T25 663 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 COL4A1P02462 1669 aa12.88□□□□□ -0.35
SLC48A1-206ENST00000548498 NTSR2O95665 410 aa12.87□□□□□ -0.35
SLC48A1-206ENST00000548498 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
SLC48A1-206ENST00000548498 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
SLC48A1-206ENST00000548498 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
SLC48A1-206ENST00000548498 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
SLC48A1-206ENST00000548498 CRAMP1Q96RY5 1269 aa12.87□□□□□ -0.35
SLC48A1-206ENST00000548498 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms