RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-211ENST00000548247 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
RACGAP1-211ENST00000548247 BEGAINQ9BUH8 593 aa17.68■□□□□ 0.42
RACGAP1-211ENST00000548247 NPC1L1Q9UHC9 1359 aa17.67■□□□□ 0.42
RACGAP1-211ENST00000548247 TRPM7Q96QT4 1865 aa17.67■□□□□ 0.42
RACGAP1-211ENST00000548247 AOC2O75106 756 aa17.67■□□□□ 0.42
RACGAP1-211ENST00000548247 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
RACGAP1-211ENST00000548247 EIF6P56537 245 aaKnown RBP17.67■□□□□ 0.42
RACGAP1-211ENST00000548247 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
RACGAP1-211ENST00000548247 SNRPA1P09661 255 aaKnown RBP17.66■□□□□ 0.42
RACGAP1-211ENST00000548247 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
RACGAP1-211ENST00000548247 TLL2Q9Y6L7 1015 aa17.66■□□□□ 0.42
RACGAP1-211ENST00000548247 ABCC12Q96J65 1359 aa17.66■□□□□ 0.42
RACGAP1-211ENST00000548247 RGL2O15211 777 aa17.65■□□□□ 0.42
RACGAP1-211ENST00000548247 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
RACGAP1-211ENST00000548247 USP50Q70EL3 339 aaPredicted RBP17.64■□□□□ 0.41
RACGAP1-211ENST00000548247 NUTM1Q86Y26 1132 aa17.64■□□□□ 0.41
RACGAP1-211ENST00000548247 MCOLN1Q9GZU1 580 aa17.64■□□□□ 0.41
RACGAP1-211ENST00000548247 CASP8AP2Q9UKL3 1982 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 MAP2K2P36507 400 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 MCM10Q7L590 875 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 LARGE2Q8N3Y3 721 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 PCDH10Q9P2E7 1040 aa17.63■□□□□ 0.41
RACGAP1-211ENST00000548247 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
RACGAP1-211ENST00000548247 RSPH6AQ9H0K4 717 aa17.62■□□□□ 0.41
RACGAP1-211ENST00000548247 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
RACGAP1-211ENST00000548247 SAPCD2Q86UD0 394 aa17.61■□□□□ 0.41
RACGAP1-211ENST00000548247 PDE4DIPQ5VU43 2346 aa17.61■□□□□ 0.41
RACGAP1-211ENST00000548247 TCERG1O14776 1098 aaKnown RBP17.6■□□□□ 0.41
RACGAP1-211ENST00000548247 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
RACGAP1-211ENST00000548247 NUP98P52948 1817 aa17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 CELF2O95319 508 aaKnown RBP17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 ADARB2Q9NS39 739 aaKnown RBP17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 GPRC5DQ9NZD1 345 aa17.59■□□□□ 0.41
RACGAP1-211ENST00000548247 NIM1KQ8IY84 436 aa17.58■□□□□ 0.4
RACGAP1-211ENST00000548247 GLIS2Q9BZE0 524 aaPredicted RBP17.58■□□□□ 0.4
RACGAP1-211ENST00000548247 RIC1Q4ADV7 1423 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 UBN2Q6ZU65 1347 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 CA12O43570 354 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 AOC3Q16853 763 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 GRIPAP1Q4V328 841 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 CRAMP1Q96RY5 1269 aa17.57■□□□□ 0.4
RACGAP1-211ENST00000548247 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 PPIP5K2O43314 1243 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 GPTP24298 496 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 CXCL9Q07325 125 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 DGKZQ13574 1117 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 CIAPIN1Q6FI81 312 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 HHIPL1Q96JK4 782 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 LAMB4A4D0S4 1761 aa17.56■□□□□ 0.4
RACGAP1-211ENST00000548247 MAP3K15Q6ZN16 1313 aa17.55■□□□□ 0.4
RACGAP1-211ENST00000548247 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
RACGAP1-211ENST00000548247 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
RACGAP1-211ENST00000548247 PGAP2Q9UHJ9 254 aa17.55■□□□□ 0.4
RACGAP1-211ENST00000548247 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
RACGAP1-211ENST00000548247 HIRAP54198 1017 aaPredicted RBP17.54■□□□□ 0.4
RACGAP1-211ENST00000548247 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
RACGAP1-211ENST00000548247 ZNF408Q9H9D4 720 aa17.54■□□□□ 0.4
RACGAP1-211ENST00000548247 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
RACGAP1-211ENST00000548247 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
RACGAP1-211ENST00000548247 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
RACGAP1-211ENST00000548247 ZNRF3Q9ULT6 936 aa17.53■□□□□ 0.4
RACGAP1-211ENST00000548247 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
RACGAP1-211ENST00000548247 NTSR2O95665 410 aa17.52■□□□□ 0.4
RACGAP1-211ENST00000548247 PPP2R1AP30153 589 aa17.52■□□□□ 0.4
RACGAP1-211ENST00000548247 ZNF34Q8IZ26 560 aa17.52■□□□□ 0.4
RACGAP1-211ENST00000548247 HTATSF1O43719 755 aaKnown RBP17.51■□□□□ 0.39
RACGAP1-211ENST00000548247 MYL6BP14649 208 aa17.51■□□□□ 0.39
RACGAP1-211ENST00000548247 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
RACGAP1-211ENST00000548247 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
RACGAP1-211ENST00000548247 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
RACGAP1-211ENST00000548247 ATP6V0A2Q9Y487 856 aa17.51■□□□□ 0.39
RACGAP1-211ENST00000548247 SHTN1A0MZ66 631 aa17.5■□□□□ 0.39
RACGAP1-211ENST00000548247 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
RACGAP1-211ENST00000548247 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
RACGAP1-211ENST00000548247 KIF6Q6ZMV9 814 aa17.5■□□□□ 0.39
RACGAP1-211ENST00000548247 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
RACGAP1-211ENST00000548247 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
RACGAP1-211ENST00000548247 RAD17O75943 681 aa17.49■□□□□ 0.39
RACGAP1-211ENST00000548247 NOGQ13253 232 aa17.49■□□□□ 0.39
RACGAP1-211ENST00000548247 CDC37L1Q7L3B6 337 aa17.49■□□□□ 0.39
RACGAP1-211ENST00000548247 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
RACGAP1-211ENST00000548247 ABCC4O15439 1325 aa17.48■□□□□ 0.39
RACGAP1-211ENST00000548247 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
RACGAP1-211ENST00000548247 HUNKP57058 714 aa17.48■□□□□ 0.39
RACGAP1-211ENST00000548247 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
RACGAP1-211ENST00000548247 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
RACGAP1-211ENST00000548247 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
RACGAP1-211ENST00000548247 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms