RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
SCN8A-205ENST00000548086 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
SCN8A-205ENST00000548086 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
SCN8A-205ENST00000548086 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
SCN8A-205ENST00000548086 ZPR1O75312 459 aa13.83□□□□□ -0.19
SCN8A-205ENST00000548086 IGHDP01880 384 aa13.83□□□□□ -0.19
SCN8A-205ENST00000548086 CENPQQ7L2Z9 268 aaPredicted RBP13.83□□□□□ -0.19
SCN8A-205ENST00000548086 NLRP10Q86W26 655 aa13.83□□□□□ -0.19
SCN8A-205ENST00000548086 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.19
SCN8A-205ENST00000548086 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.19
SCN8A-205ENST00000548086 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.19
SCN8A-205ENST00000548086 GNAI3P08754 354 aa13.83□□□□□ -0.2
SCN8A-205ENST00000548086 SSFA2P28290 1259 aa13.83□□□□□ -0.2
SCN8A-205ENST00000548086 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
SCN8A-205ENST00000548086 SIRT2Q8IXJ6 389 aa13.83□□□□□ -0.2
SCN8A-205ENST00000548086 ZNF34Q8IZ26 560 aa13.83□□□□□ -0.2
SCN8A-205ENST00000548086 NIP7Q9Y221 180 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCN8A-205ENST00000548086 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-205ENST00000548086 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 KAZALD1Q96I82 304 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 SUCLG2Q96I99 432 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 PNPLA7Q6ZV29 1317 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 GNAI2P04899 355 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 ADRA2BP18089 450 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
SCN8A-205ENST00000548086 UTYO14607 1347 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 CASP7P55210 303 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 SLC15A2Q16348 729 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 SUSD4Q5VX71 490 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 CHMP4BQ9H444 224 aaKnown RBP13.81□□□□□ -0.2
SCN8A-205ENST00000548086 ZNF652Q9Y2D9 606 aa13.81□□□□□ -0.2
SCN8A-205ENST00000548086 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
SCN8A-205ENST00000548086 PDGFDQ9GZP0 370 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-205ENST00000548086 PNMA6EA0A0J9YXQ4 647 aa13.8□□□□□ -0.2
SCN8A-205ENST00000548086 H7C1W4 665 aa13.8□□□□□ -0.2
SCN8A-205ENST00000548086 GYS1P13807 737 aa13.8□□□□□ -0.2
SCN8A-205ENST00000548086 AAMPQ13685 434 aa13.8□□□□□ -0.2
SCN8A-205ENST00000548086 CLEC4GQ6UXB4 293 aa13.8□□□□□ -0.2
SCN8A-205ENST00000548086 BICC1Q9H694 974 aaKnown RBP13.8□□□□□ -0.2
SCN8A-205ENST00000548086 STK32BQ9NY57 414 aa13.8□□□□□ -0.2
SCN8A-205ENST00000548086 TRMT112Q9UI30 125 aaKnown RBP13.8□□□□□ -0.2
SCN8A-205ENST00000548086 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
SCN8A-205ENST00000548086 CCDC24Q8N4L8 307 aa13.78□□□□□ -0.2
SCN8A-205ENST00000548086 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
SCN8A-205ENST00000548086 NTSR2O95665 410 aa13.78□□□□□ -0.2
SCN8A-205ENST00000548086 NFIXQ14938 502 aa13.78□□□□□ -0.2
SCN8A-205ENST00000548086 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
SCN8A-205ENST00000548086 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
SCN8A-205ENST00000548086 ZBTB38Q8NAP3 1195 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-205ENST00000548086 COL24A1Q17RW2 1714 aa13.77□□□□□ -0.2
SCN8A-205ENST00000548086 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
SCN8A-205ENST00000548086 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
SCN8A-205ENST00000548086 IBTKQ9P2D0 1353 aaPredicted RBP13.77□□□□□ -0.21
SCN8A-205ENST00000548086 PPP1R42Q7Z4L9 355 aa13.76□□□□□ -0.21
SCN8A-205ENST00000548086 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-205ENST00000548086 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
SCN8A-205ENST00000548086 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
SCN8A-205ENST00000548086 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
SCN8A-205ENST00000548086 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-205ENST00000548086 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
SCN8A-205ENST00000548086 FOXO4P98177 505 aa13.76□□□□□ -0.21
SCN8A-205ENST00000548086 PARP10Q53GL7 1025 aa13.76□□□□□ -0.21
SCN8A-205ENST00000548086 RPAP2Q8IXW5 612 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-205ENST00000548086 DDX60Q8IY21 1712 aaKnown RBP13.75□□□□□ -0.21
SCN8A-205ENST00000548086 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-205ENST00000548086 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
SCN8A-205ENST00000548086 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-205ENST00000548086 C8orf34Q49A92 452 aa13.75□□□□□ -0.21
SCN8A-205ENST00000548086 ERFEQ4G0M1 354 aa13.75□□□□□ -0.21
SCN8A-205ENST00000548086 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-205ENST00000548086 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
SCN8A-205ENST00000548086 ABCC12Q96J65 1359 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 DDR1Q08345 913 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 LMBR1LQ6UX01 489 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-205ENST00000548086 KLHDC4Q8TBB5 520 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 CHMP3Q9Y3E7 222 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 QSER1Q2KHR3 1735 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 RGL2O15211 777 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 FLAD1Q8NFF5 587 aa13.74□□□□□ -0.21
SCN8A-205ENST00000548086 PA2G4Q9UQ80 394 aaKnown RBP13.74□□□□□ -0.21
SCN8A-205ENST00000548086 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 CARMIL3Q8ND23 1372 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 APBB1O00213 710 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 TM4SF1P30408 202 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 RABL6Q3YEC7 729 aaPredicted RBP13.73□□□□□ -0.21
SCN8A-205ENST00000548086 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 MYH3P11055 1940 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 CASZ1Q86V15 1759 aa13.73□□□□□ -0.21
SCN8A-205ENST00000548086 MTX1Q13505 466 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 NBR1Q14596 966 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-205ENST00000548086 POLA2Q14181 598 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms