RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 POLD1P28340 1107 aa12.24□□□□□ -0.45
PTPRR-206ENST00000547752 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
PTPRR-206ENST00000547752 PARP10Q53GL7 1025 aa12.24□□□□□ -0.45
PTPRR-206ENST00000547752 ZKSCAN2Q63HK3 967 aa12.24□□□□□ -0.45
PTPRR-206ENST00000547752 ATF7IPQ6VMQ6 1270 aa12.24□□□□□ -0.45
PTPRR-206ENST00000547752 ANKRD36CQ5JPF3 1778 aa12.24□□□□□ -0.45
PTPRR-206ENST00000547752 ABCC4O15439 1325 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 SLC4A10Q6U841 1118 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 LINS1Q8NG48 757 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 RLBP1P12271 317 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
PTPRR-206ENST00000547752 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 CCDC191Q8NCU4 936 aa12.23□□□□□ -0.45
PTPRR-206ENST00000547752 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
PTPRR-206ENST00000547752 AFDNP55196 1824 aaKnown RBP12.22□□□□□ -0.45
PTPRR-206ENST00000547752 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
PTPRR-206ENST00000547752 GCKRQ14397 625 aa12.22□□□□□ -0.45
PTPRR-206ENST00000547752 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
PTPRR-206ENST00000547752 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
PTPRR-206ENST00000547752 JARID2Q92833 1246 aaPredicted RBP12.22□□□□□ -0.45
PTPRR-206ENST00000547752 CLUAP1Q96AJ1 413 aa12.22□□□□□ -0.45
PTPRR-206ENST00000547752 SRCIN1Q9C0H9 1055 aa12.22□□□□□ -0.45
PTPRR-206ENST00000547752 CWC25Q9NXE8 425 aaPredicted RBP12.22□□□□□ -0.45
PTPRR-206ENST00000547752 PXDNLA1KZ92 1463 aa12.22□□□□□ -0.45
PTPRR-206ENST00000547752 ALDH1L1O75891 902 aa12.21□□□□□ -0.45
PTPRR-206ENST00000547752 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
PTPRR-206ENST00000547752 PPP1R42Q7Z4L9 355 aa12.21□□□□□ -0.45
PTPRR-206ENST00000547752 ABCC12Q96J65 1359 aa12.21□□□□□ -0.46
PTPRR-206ENST00000547752 H7C1W4 665 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 PCCAP05165 728 aaPredicted RBP12.2□□□□□ -0.46
PTPRR-206ENST00000547752 CASP7P55210 303 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 TPTE2Q6XPS3 522 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 DZIP1LQ8IYY4 767 aaKnown RBP12.2□□□□□ -0.46
PTPRR-206ENST00000547752 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 NYXQ9GZU5 481 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
PTPRR-206ENST00000547752 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
PTPRR-206ENST00000547752 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
PTPRR-206ENST00000547752 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
PTPRR-206ENST00000547752 ZBTB38Q8NAP3 1195 aaPredicted RBP12.2□□□□□ -0.46
PTPRR-206ENST00000547752 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
PTPRR-206ENST00000547752 LRP5O75197 1615 aa12.19□□□□□ -0.46
PTPRR-206ENST00000547752 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
PTPRR-206ENST00000547752 RTL5Q5HYW3 569 aaPredicted RBP12.19□□□□□ -0.46
PTPRR-206ENST00000547752 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
PTPRR-206ENST00000547752 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
PTPRR-206ENST00000547752 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
PTPRR-206ENST00000547752 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
PTPRR-206ENST00000547752 UTYO14607 1347 aa12.18□□□□□ -0.46
PTPRR-206ENST00000547752 N4BP2Q86UW6 1770 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 GRM8O00222 908 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 ST5P78524 1137 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 BRIP1Q9BX63 1249 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 IRS4O14654 1257 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 UBE3BQ7Z3V4 1068 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
PTPRR-206ENST00000547752 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
PTPRR-206ENST00000547752 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
PTPRR-206ENST00000547752 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 KIF13BQ9NQT8 1826 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 NPHP1O15259 732 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 NLGN2Q8NFZ4 835 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 MEIS3Q99687 375 aa12.16□□□□□ -0.46
PTPRR-206ENST00000547752 PPP1R1BQ9UD71 204 aaPredicted RBP12.16□□□□□ -0.46
PTPRR-206ENST00000547752 MS4A1P11836 297 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 SUCLG2Q96I99 432 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 C9orf78Q9NZ63 289 aaPredicted RBP12.15□□□□□ -0.46
PTPRR-206ENST00000547752 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
PTPRR-206ENST00000547752 KIAA1551Q9HCM1 1747 aa12.15□□□□□ -0.46
PTPRR-206ENST00000547752 DPEP1P16444 411 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 KCNA3P22001 575 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 CHRNA5P30532 468 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 FOXO4P98177 505 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 ITPRIPQ8IWB1 547 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms