RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TUBGCP6Q96RT7 1819 aa19.86■□□□□ 0.77
TRAFD1-203ENST00000547063 PCCAP05165 728 aaPredicted RBP19.85■□□□□ 0.77
TRAFD1-203ENST00000547063 HSP90B1P14625 803 aaKnown RBP19.85■□□□□ 0.77
TRAFD1-203ENST00000547063 GPTP24298 496 aa19.85■□□□□ 0.77
TRAFD1-203ENST00000547063 PNPLA7Q6ZV29 1317 aa19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 H7C1W4 665 aa19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 MSH5O43196 834 aa19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 NBPF7P0C2Y1 421 aaPredicted RBP19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 SMIM5Q71RC9 77 aa19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 ZBTB38Q8NAP3 1195 aaPredicted RBP19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 SETDB2Q96T68 719 aa19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 BCL2L12Q9HB09 334 aa19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 ANO8Q9HCE9 1232 aaPredicted RBP19.84■□□□□ 0.77
TRAFD1-203ENST00000547063 UBE3BQ7Z3V4 1068 aa19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 RPAP2Q8IXW5 612 aaPredicted RBP19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 NLGN1Q8N2Q7 840 aa19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 CCDC136Q96JN2 1154 aa19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 UTP14AQ9BVJ6 771 aaKnown RBP19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 NYXQ9GZU5 481 aa19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 TRMT112Q9UI30 125 aaKnown RBP19.83■□□□□ 0.77
TRAFD1-203ENST00000547063 GYS1P13807 737 aa19.82■□□□□ 0.76
TRAFD1-203ENST00000547063 UBN2Q6ZU65 1347 aa19.81■□□□□ 0.76
TRAFD1-203ENST00000547063 CDHR2Q9BYE9 1310 aa19.81■□□□□ 0.76
TRAFD1-203ENST00000547063 TBC1D9BQ66K14 1250 aa19.81■□□□□ 0.76
TRAFD1-203ENST00000547063 RWDD1Q9H446 243 aaPredicted RBP19.81■□□□□ 0.76
TRAFD1-203ENST00000547063 LRRFIP2Q9Y608 721 aaKnown RBP19.81■□□□□ 0.76
TRAFD1-203ENST00000547063 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
TRAFD1-203ENST00000547063 HMMRO75330 724 aa19.8■□□□□ 0.76
TRAFD1-203ENST00000547063 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 CASP7P55210 303 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 SUSD4Q5VX71 490 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 TPTE2Q6XPS3 522 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 BICDL1Q6ZP65 573 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 ILDR2Q71H61 639 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 ANKRD44Q8N8A2 993 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 SLC16A10Q8TF71 515 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 PCDHB15Q9Y5E8 787 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 COL24A1Q17RW2 1714 aa19.79■□□□□ 0.76
TRAFD1-203ENST00000547063 NFIXQ14938 502 aa19.78■□□□□ 0.76
TRAFD1-203ENST00000547063 NBPF5PQ86XG9 351 aaPredicted RBP19.78■□□□□ 0.76
TRAFD1-203ENST00000547063 NTSR2O95665 410 aa19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 GTF2E1P29083 439 aaPredicted RBP19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 CEP85Q6P2H3 762 aa19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 FAM89AQ96GI7 184 aa19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 SUCLG2Q96I99 432 aa19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 PLA2G12BQ9BX93 195 aa19.77■□□□□ 0.76
TRAFD1-203ENST00000547063 NPHP1O15259 732 aa19.76■□□□□ 0.75
TRAFD1-203ENST00000547063 TM4SF1P30408 202 aa19.76■□□□□ 0.75
TRAFD1-203ENST00000547063 ATP8B2P98198 1209 aa19.76■□□□□ 0.75
TRAFD1-203ENST00000547063 MTX1Q13505 466 aa19.76■□□□□ 0.75
TRAFD1-203ENST00000547063 IRS4O14654 1257 aaPredicted RBP19.75■□□□□ 0.75
TRAFD1-203ENST00000547063 BICC1Q9H694 974 aaKnown RBP19.75■□□□□ 0.75
TRAFD1-203ENST00000547063 FAM177BA6PVY3 158 aa19.74■□□□□ 0.75
TRAFD1-203ENST00000547063 PDE8AO60658 829 aa19.74■□□□□ 0.75
TRAFD1-203ENST00000547063 RABL6Q3YEC7 729 aaPredicted RBP19.74■□□□□ 0.75
TRAFD1-203ENST00000547063 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
TRAFD1-203ENST00000547063 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
TRAFD1-203ENST00000547063 CENPQQ7L2Z9 268 aaPredicted RBP19.73■□□□□ 0.75
TRAFD1-203ENST00000547063 CNBD1Q8NA66 436 aa19.73■□□□□ 0.75
TRAFD1-203ENST00000547063 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
TRAFD1-203ENST00000547063 KAZALD1Q96I82 304 aa19.73■□□□□ 0.75
TRAFD1-203ENST00000547063 LAMB2P55268 1798 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 MYH3P11055 1940 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 SRGAP3O43295 1099 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 SERPINB2P05120 415 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 FOXO4P98177 505 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 SLC10A5Q5PT55 438 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 SSH3Q8TE77 659 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 PARP3Q9Y6F1 533 aa19.72■□□□□ 0.75
TRAFD1-203ENST00000547063 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
TRAFD1-203ENST00000547063 ST5P78524 1137 aa19.71■□□□□ 0.75
TRAFD1-203ENST00000547063 LMBR1LQ6UX01 489 aa19.71■□□□□ 0.75
TRAFD1-203ENST00000547063 SIRT2Q8IXJ6 389 aa19.71■□□□□ 0.75
TRAFD1-203ENST00000547063 RIC1Q4ADV7 1423 aa19.7■□□□□ 0.74
TRAFD1-203ENST00000547063 CTSWP56202 376 aa19.7■□□□□ 0.74
TRAFD1-203ENST00000547063 POLA2Q14181 598 aa19.7■□□□□ 0.74
TRAFD1-203ENST00000547063 ERFEQ4G0M1 354 aa19.7■□□□□ 0.74
TRAFD1-203ENST00000547063 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
TRAFD1-203ENST00000547063 GCC1Q96CN9 775 aa19.7■□□□□ 0.74
TRAFD1-203ENST00000547063 CSF1RP07333 972 aa19.69■□□□□ 0.74
TRAFD1-203ENST00000547063 MMP10P09238 476 aa19.69■□□□□ 0.74
TRAFD1-203ENST00000547063 HSP90AB4PQ58FF6 505 aa19.69■□□□□ 0.74
TRAFD1-203ENST00000547063 EPHA10Q5JZY3 1008 aa19.69■□□□□ 0.74
TRAFD1-203ENST00000547063 SYNE4Q8N205 404 aa19.69■□□□□ 0.74
TRAFD1-203ENST00000547063 CHMP3Q9Y3E7 222 aa19.69■□□□□ 0.74
TRAFD1-203ENST00000547063 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 PNMA6EA0A0J9YXQ4 647 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 IGHDP01880 384 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 HCLS1P14317 486 aaPredicted RBP19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 DDR1Q08345 913 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 CCDC152Q4G0S7 254 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 PRR5LQ6MZQ0 368 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 TTLL11Q8NHH1 800 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 NLRP3Q96P20 1036 aa19.68■□□□□ 0.74
TRAFD1-203ENST00000547063 R3HDM1Q15032 1099 aaKnown RBP19.67■□□□□ 0.74
TRAFD1-203ENST00000547063 CCDC57Q2TAC2 916 aa19.67■□□□□ 0.74
TRAFD1-203ENST00000547063 MSL1Q68DK7 614 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms