RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
R3HDM2-210ENST00000547019 HHIPL1Q96JK4 782 aa13.27□□□□□ -0.29
R3HDM2-210ENST00000547019 EIF6P56537 245 aaKnown RBP13.26□□□□□ -0.29
R3HDM2-210ENST00000547019 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
R3HDM2-210ENST00000547019 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
R3HDM2-210ENST00000547019 JDP2Q8WYK2 163 aa13.26□□□□□ -0.29
R3HDM2-210ENST00000547019 NPC1L1Q9UHC9 1359 aa13.26□□□□□ -0.29
R3HDM2-210ENST00000547019 LAMB4A4D0S4 1761 aa13.25□□□□□ -0.29
R3HDM2-210ENST00000547019 FAM177BA6PVY3 158 aa13.25□□□□□ -0.29
R3HDM2-210ENST00000547019 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
R3HDM2-210ENST00000547019 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
R3HDM2-210ENST00000547019 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
R3HDM2-210ENST00000547019 LAMB2P55268 1798 aa13.25□□□□□ -0.29
R3HDM2-210ENST00000547019 HTTP42858 3142 aa13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
R3HDM2-210ENST00000547019 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
R3HDM2-210ENST00000547019 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
R3HDM2-210ENST00000547019 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
R3HDM2-210ENST00000547019 TRPM4Q8TD43 1214 aa13.23□□□□□ -0.29
R3HDM2-210ENST00000547019 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
R3HDM2-210ENST00000547019 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
R3HDM2-210ENST00000547019 NOGQ13253 232 aa13.22□□□□□ -0.29
R3HDM2-210ENST00000547019 HLFQ16534 295 aa13.22□□□□□ -0.29
R3HDM2-210ENST00000547019 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-210ENST00000547019 PGAP2Q9UHJ9 254 aa13.22□□□□□ -0.29
R3HDM2-210ENST00000547019 TAF1P21675 1872 aa13.22□□□□□ -0.29
R3HDM2-210ENST00000547019 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-210ENST00000547019 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 AOC3Q16853 763 aa13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 NBPF10Q6P3W6 841 aaKnown RBP13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 NBPF15Q8N660 670 aa13.21□□□□□ -0.29
R3HDM2-210ENST00000547019 BRCA2P51587 3418 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 GMPSP49915 693 aaPredicted RBP13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 HUNKP57058 714 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 CXCL9Q07325 125 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 RNF186Q9NXI6 227 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 CENPFP49454 3210 aa13.2□□□□□ -0.3
R3HDM2-210ENST00000547019 TRPA1O75762 1119 aa13.19□□□□□ -0.3
R3HDM2-210ENST00000547019 TEFQ10587 303 aa13.19□□□□□ -0.3
R3HDM2-210ENST00000547019 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
R3HDM2-210ENST00000547019 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
R3HDM2-210ENST00000547019 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
R3HDM2-210ENST00000547019 SAGE1Q9NXZ1 904 aa13.19□□□□□ -0.3
R3HDM2-210ENST00000547019 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
R3HDM2-210ENST00000547019 PPIP5K2O43314 1243 aa13.18□□□□□ -0.3
R3HDM2-210ENST00000547019 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
R3HDM2-210ENST00000547019 CTU1Q7Z7A3 348 aaKnown RBP13.18□□□□□ -0.3
R3HDM2-210ENST00000547019 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
R3HDM2-210ENST00000547019 SZT2Q5T011 3432 aa13.17□□□□□ -0.3
R3HDM2-210ENST00000547019 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
R3HDM2-210ENST00000547019 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
R3HDM2-210ENST00000547019 KIF23Q02241 960 aaPredicted RBP13.17□□□□□ -0.3
R3HDM2-210ENST00000547019 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
R3HDM2-210ENST00000547019 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 EGFRP00533 1210 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 ANKRD36CQ5JPF3 1778 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
R3HDM2-210ENST00000547019 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.3
R3HDM2-210ENST00000547019 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
R3HDM2-210ENST00000547019 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
R3HDM2-210ENST00000547019 CDC37L1Q7L3B6 337 aa13.15□□□□□ -0.3
R3HDM2-210ENST00000547019 COL4A1P02462 1669 aa13.15□□□□□ -0.31
R3HDM2-210ENST00000547019 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 RAD17O75943 681 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 SLC10A3P09131 477 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 CSRNP1Q96S65 589 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 ZNRF3Q9ULT6 936 aa13.14□□□□□ -0.31
R3HDM2-210ENST00000547019 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
R3HDM2-210ENST00000547019 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
R3HDM2-210ENST00000547019 RGL2O15211 777 aa13.13□□□□□ -0.31
R3HDM2-210ENST00000547019 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
R3HDM2-210ENST00000547019 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
R3HDM2-210ENST00000547019 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
R3HDM2-210ENST00000547019 GTF2E1P29083 439 aaPredicted RBP13.12□□□□□ -0.31
R3HDM2-210ENST00000547019 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
R3HDM2-210ENST00000547019 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
R3HDM2-210ENST00000547019 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms