RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 ALDH1L2Q3SY69 923 aa32.47■■■□□ 2.79
NKX2-1-205ENST00000546983 BCS1LQ9Y276 419 aa32.47■■■□□ 2.79
NKX2-1-205ENST00000546983 SH3TC1Q8TE82 1336 aa32.47■■■□□ 2.79
NKX2-1-205ENST00000546983 PI4KAP2A4QPH2 592 aa32.46■■■□□ 2.79
NKX2-1-205ENST00000546983 SRGNP10124 158 aa32.46■■■□□ 2.79
NKX2-1-205ENST00000546983 NPR1P16066 1061 aa32.46■■■□□ 2.79
NKX2-1-205ENST00000546983 SLC10A5Q5PT55 438 aa32.46■■■□□ 2.79
NKX2-1-205ENST00000546983 PI4KAP1Q8N8J0 262 aa32.46■■■□□ 2.79
NKX2-1-205ENST00000546983 MAP3K2Q9Y2U5 619 aa32.46■■■□□ 2.79
NKX2-1-205ENST00000546983 NLRP3Q96P20 1036 aa32.45■■■□□ 2.79
NKX2-1-205ENST00000546983 YBX3P16989 372 aaKnown RBP eCLIP32.44■■■□□ 2.78
NKX2-1-205ENST00000546983 ALDH1B1P30837 517 aa32.44■■■□□ 2.78
NKX2-1-205ENST00000546983 KIAA1551Q9HCM1 1747 aa32.43■■■□□ 2.78
NKX2-1-205ENST00000546983 ANKRD36CQ5JPF3 1778 aa32.43■■■□□ 2.78
NKX2-1-205ENST00000546983 TCERG1O14776 1098 aaKnown RBP32.43■■■□□ 2.78
NKX2-1-205ENST00000546983 ERFEQ4G0M1 354 aa32.43■■■□□ 2.78
NKX2-1-205ENST00000546983 NUTM1Q86Y26 1132 aa32.42■■■□□ 2.78
NKX2-1-205ENST00000546983 ZNF622Q969S3 477 aaKnown RBP eCLIP32.42■■■□□ 2.78
NKX2-1-205ENST00000546983 MYD88Q99836 296 aa32.42■■■□□ 2.78
NKX2-1-205ENST00000546983 CWC25Q9NXE8 425 aaPredicted RBP32.42■■■□□ 2.78
NKX2-1-205ENST00000546983 CRY2Q49AN0 593 aa32.41■■■□□ 2.78
NKX2-1-205ENST00000546983 SOGA3Q5TF21 947 aa32.41■■■□□ 2.78
NKX2-1-205ENST00000546983 DNAAF4Q8WXU2 420 aa32.41■■■□□ 2.78
NKX2-1-205ENST00000546983 ATP5J2-PTCD1G3V325 749 aa32.4■■■□□ 2.78
NKX2-1-205ENST00000546983 CCDC24Q8N4L8 307 aa32.4■■■□□ 2.78
NKX2-1-205ENST00000546983 PTPRCP08575 1304 aa32.4■■■□□ 2.78
NKX2-1-205ENST00000546983 N4BP2Q86UW6 1770 aaPredicted RBP32.4■■■□□ 2.78
NKX2-1-205ENST00000546983 G2E3Q7L622 706 aa32.39■■■□□ 2.78
NKX2-1-205ENST00000546983 ZBTB38Q8NAP3 1195 aaPredicted RBP32.39■■■□□ 2.78
NKX2-1-205ENST00000546983 RPGRQ92834 1020 aaKnown RBP32.39■■■□□ 2.78
NKX2-1-205ENST00000546983 ADCY9O60503 1353 aa32.39■■■□□ 2.78
NKX2-1-205ENST00000546983 ARFGEF2Q9Y6D5 1785 aa32.38■■■□□ 2.77
NKX2-1-205ENST00000546983 LINS1Q8NG48 757 aa32.37■■■□□ 2.77
NKX2-1-205ENST00000546983 ABCC12Q96J65 1359 aa32.36■■■□□ 2.77
NKX2-1-205ENST00000546983 PCCAP05165 728 aaPredicted RBP32.36■■■□□ 2.77
NKX2-1-205ENST00000546983 RBM17Q96I25 401 aaKnown RBP32.36■■■□□ 2.77
NKX2-1-205ENST00000546983 ANKRD31Q8N7Z5 1873 aa32.35■■■□□ 2.77
NKX2-1-205ENST00000546983 DLEC1Q9Y238 1755 aa32.35■■■□□ 2.77
NKX2-1-205ENST00000546983 HOXA10P31260 410 aaPredicted RBP32.35■■■□□ 2.77
NKX2-1-205ENST00000546983 BRPF1P55201 1214 aaPredicted RBP32.35■■■□□ 2.77
NKX2-1-205ENST00000546983 GRIPAP1Q4V328 841 aa32.34■■■□□ 2.77
NKX2-1-205ENST00000546983 CRAMP1Q96RY5 1269 aa32.34■■■□□ 2.77
NKX2-1-205ENST00000546983 BRCA1P38398 1863 aaKnown RBP32.33■■■□□ 2.77
NKX2-1-205ENST00000546983 MRPL50Q8N5N7 158 aaKnown RBP32.33■■■□□ 2.77
NKX2-1-205ENST00000546983 SSH1Q8WYL5 1049 aa32.33■■■□□ 2.77
NKX2-1-205ENST00000546983 SMC4Q9NTJ3 1288 aa32.33■■■□□ 2.77
NKX2-1-205ENST00000546983 WWC3Q9ULE0 1092 aa32.32■■■□□ 2.76
NKX2-1-205ENST00000546983 NEURL1BA8MQ27 555 aa32.31■■■□□ 2.76
NKX2-1-205ENST00000546983 CC2D2BQ6DHV5 1058 aa32.31■■■□□ 2.76
NKX2-1-205ENST00000546983 PRPF40BQ6NWY9 871 aaKnown RBP32.31■■■□□ 2.76
NKX2-1-205ENST00000546983 ARHGAP27Q6ZUM4 889 aa32.31■■■□□ 2.76
NKX2-1-205ENST00000546983 FAM89AQ96GI7 184 aa32.31■■■□□ 2.76
NKX2-1-205ENST00000546983 TMX4Q9H1E5 349 aaPredicted RBP32.31■■■□□ 2.76
NKX2-1-205ENST00000546983 CDHR2Q9BYE9 1310 aa32.3■■■□□ 2.76
NKX2-1-205ENST00000546983 IRS4O14654 1257 aaPredicted RBP32.3■■■□□ 2.76
NKX2-1-205ENST00000546983 ARFGEF1Q9Y6D6 1849 aa32.3■■■□□ 2.76
NKX2-1-205ENST00000546983 IGKV5-2P06315 115 aa32.29■■■□□ 2.76
NKX2-1-205ENST00000546983 KIF16BQ96L93 1317 aa32.28■■■□□ 2.76
NKX2-1-205ENST00000546983 ALDH1L1O75891 902 aa32.28■■■□□ 2.76
NKX2-1-205ENST00000546983 SF3B3Q15393 1217 aaKnown RBP32.28■■■□□ 2.76
NKX2-1-205ENST00000546983 DDX46Q7L014 1031 aaKnown RBP32.28■■■□□ 2.76
NKX2-1-205ENST00000546983 TMC4Q7Z404 712 aa32.28■■■□□ 2.76
NKX2-1-205ENST00000546983 HCLS1P14317 486 aaPredicted RBP32.27■■■□□ 2.76
NKX2-1-205ENST00000546983 PDE8AO60658 829 aa32.26■■■□□ 2.75
NKX2-1-205ENST00000546983 YY1P25490 414 aa32.26■■■□□ 2.75
NKX2-1-205ENST00000546983 GCKRQ14397 625 aa32.26■■■□□ 2.75
NKX2-1-205ENST00000546983 BBOX1O75936 387 aa32.25■■■□□ 2.75
NKX2-1-205ENST00000546983 RARSP54136 660 aaKnown RBP32.25■■■□□ 2.75
NKX2-1-205ENST00000546983 COL11A2P13942 1736 aaPredicted RBP32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 IPO8O15397 1037 aaKnown RBP32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 CWF19L2Q2TBE0 894 aaKnown RBP32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 CCDC93Q567U6 631 aa32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 BEND3Q5T5X7 828 aa32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 RTKN2Q8IZC4 609 aa32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 API5Q9BZZ5 524 aaKnown RBP32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 SRCIN1Q9C0H9 1055 aa32.24■■■□□ 2.75
NKX2-1-205ENST00000546983 H7C1W4 665 aa32.23■■■□□ 2.75
NKX2-1-205ENST00000546983 CCDC152Q4G0S7 254 aa32.23■■■□□ 2.75
NKX2-1-205ENST00000546983 ARHGAP45Q92619 1136 aa32.23■■■□□ 2.75
NKX2-1-205ENST00000546983 C21orf2O43822 256 aa32.22■■■□□ 2.75
NKX2-1-205ENST00000546983 LTBP3Q9NS15 1303 aa32.22■■■□□ 2.75
NKX2-1-205ENST00000546983 F6X3S4 739 aa32.21■■■□□ 2.75
NKX2-1-205ENST00000546983 SLC4A10Q6U841 1118 aa32.21■■■□□ 2.75
NKX2-1-205ENST00000546983 SYNE4Q8N205 404 aa32.21■■■□□ 2.75
NKX2-1-205ENST00000546983 CHD4Q14839 1912 aa32.2■■■□□ 2.75
NKX2-1-205ENST00000546983 C7orf43Q8WVR3 580 aa32.2■■■□□ 2.75
NKX2-1-205ENST00000546983 BCL2L13Q9BXK5 485 aa32.2■■■□□ 2.75
NKX2-1-205ENST00000546983 TNRC6CQ9HCJ0 1690 aaKnown RBP32.2■■■□□ 2.74
NKX2-1-205ENST00000546983 GRAPQ13588 217 aa32.19■■■□□ 2.74
NKX2-1-205ENST00000546983 RTL5Q5HYW3 569 aaPredicted RBP32.19■■■□□ 2.74
NKX2-1-205ENST00000546983 GRAPLQ8TC17 118 aaPredicted RBP32.19■■■□□ 2.74
NKX2-1-205ENST00000546983 PLA2G12BQ9BX93 195 aa32.19■■■□□ 2.74
NKX2-1-205ENST00000546983 PPEF1O14829 653 aaPredicted RBP32.18■■■□□ 2.74
NKX2-1-205ENST00000546983 UBE3BQ7Z3V4 1068 aa32.18■■■□□ 2.74
NKX2-1-205ENST00000546983 C9orf78Q9NZ63 289 aaPredicted RBP32.18■■■□□ 2.74
NKX2-1-205ENST00000546983 TAOK3Q9H2K8 898 aa32.17■■■□□ 2.74
NKX2-1-205ENST00000546983 ZC3H4Q9UPT8 1303 aaKnown RBP32.17■■■□□ 2.74
NKX2-1-205ENST00000546983 LMNB1P20700 586 aa32.16■■■□□ 2.74
NKX2-1-205ENST00000546983 C3orf67Q6ZVT6 689 aa32.16■■■□□ 2.74
NKX2-1-205ENST00000546983 GRM8O00222 908 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms