RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 HOXC13P31276 330 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 KIF5BP33176 963 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 NOS2P35228 1153 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 ABL2P42684 1182 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 KCNJ4P48050 445 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 GSCP56915 257 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 GEMIN4P57678 1058 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 IRX1P78414 480 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 RAD51AP2Q09MP3 1159 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 BIRC3Q13489 604 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 SMC1AQ14683 1233 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 KIF22Q14807 665 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 PPP2R5AQ15172 486 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 MUM1Q2TAK8 710 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 TTC31Q49AM3 519 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 ALFQ53S48 1182 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 INO80DQ53TQ3 878 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 PLEKHG4Q58EX7 1191 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 HYIQ5T013 277 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 CFAP70Q5T0N1 1121 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 CCDC122Q5T0U0 273 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 ANKRD45Q5TZF3 282 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 RNF20Q5VTR2 975 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 TSHZ3Q63HK5 1081 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 TTC19Q6DKK2 380 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 CCBE1Q6UXH8 406 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 TAS1R3Q7RTX0 852 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 FBXO33Q7Z6M2 555 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 SKAP1Q86WV1 359 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 ERC1Q8IUD2 1116 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 RBM12BQ8IXT5 1001 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 PLPP6Q8IY26 295 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 FAM184AQ8NB25 1140 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 MYRIPQ8NFW9 859 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 SH3TC2Q8TF17 1288 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 MAML1Q92585 1016 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 TAF4BQ92750 862 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 NAF1Q96HR8 494 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 IPO9Q96P70 1041 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 SERINC2Q96SA4 455 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 GMLQ99445 158 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 BAG1Q99933 345 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 SGIP1Q9BQI5 828 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 TACO1Q9BSH4 297 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 RPAP3Q9H6T3 665 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 CCSER2Q9H7U1 834 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 CD248Q9HCU0 757 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 KMT5AQ9NQR1 393 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 ZNHIT6Q9NWK9 470 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 C6orf203Q9P0P8 240 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 CLIP2Q9UDT6 1046 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 IP6K2Q9UHH9 426 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 EVLQ9UI08 416 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 HDAC9Q9UKV0 1011 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 BARX2Q9UMQ3 279 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 ZNF232Q9UNY5 417 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 ATP8A1Q9Y2Q0 1164 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 ATP6V0A2Q9Y487 856 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.32□□□□□ -2.04
CFTR-207ENST00000546407 EID1Q9Y6B2 187 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 SQORQ9Y6N5 450 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 MINK1Q8N4C8 1332 aaPredicted RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 DYTNA2CJ06 578 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PRRT4C9JH25 899 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SOCS7O14512 581 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 DYNC1I1O14576 645 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SLC26A4O43511 780 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 KINO60870 393 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 CLASP2O75122 1294 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 KRT38O76015 456 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 OATP04181 439 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 IMPDH2P12268 514 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 IDEP14735 1019 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 ENPP1P22413 925 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 CDC27P30260 824 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 HOXA10P31260 410 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 DDIT3P35638 169 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 USP8P40818 1118 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 TNNT3P45378 269 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 NOP2P46087 812 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 MDM2Q00987 491 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 AMPD3Q01432 767 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 MAP2K5Q13163 448 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 GNL2Q13823 731 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 EIF4A2Q14240 407 aaKnown RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 MYBPC3Q14896 1274 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PDCD2Q16342 344 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 FXNQ16595 210 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 GRAMD1BQ3KR37 738 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 COBLL1Q53SF7 1204 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 WDR45BQ5MNZ6 344 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 SYCP2LQ5T4T6 812 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 ACBD5Q5T8D3 534 aaPredicted RBP2.31□□□□□ -2.04
CFTR-207ENST00000546407 DUSP27Q5VZP5 1158 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 KANK3Q6NY19 840 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 PDXDC2PQ6P474 469 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 WAPLQ7Z5K2 1190 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 CCDC91Q7Z6B0 441 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 TRIM74Q86UV6 250 aa2.31□□□□□ -2.04
CFTR-207ENST00000546407 TRIM73Q86UV7 250 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms