RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 C1QTNF8P60827 252 aa20.57■□□□□ 0.88
PPP1CA-211ENST00000546202 CCDC191Q8NCU4 936 aa20.57■□□□□ 0.88
PPP1CA-211ENST00000546202 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
PPP1CA-211ENST00000546202 DDX19BQ9UMR2 479 aa20.57■□□□□ 0.88
PPP1CA-211ENST00000546202 UBN2Q6ZU65 1347 aa20.56■□□□□ 0.88
PPP1CA-211ENST00000546202 ZBTB7BO15156 539 aaPredicted RBP20.56■□□□□ 0.88
PPP1CA-211ENST00000546202 GCKRQ14397 625 aa20.56■□□□□ 0.88
PPP1CA-211ENST00000546202 NLRP10Q86W26 655 aa20.56■□□□□ 0.88
PPP1CA-211ENST00000546202 GPTP24298 496 aa20.55■□□□□ 0.88
PPP1CA-211ENST00000546202 FKBP8Q14318 412 aa20.55■□□□□ 0.88
PPP1CA-211ENST00000546202 TBC1D9BQ66K14 1250 aa20.55■□□□□ 0.88
PPP1CA-211ENST00000546202 USP44Q9H0E7 712 aa20.55■□□□□ 0.88
PPP1CA-211ENST00000546202 CWC25Q9NXE8 425 aaPredicted RBP20.55■□□□□ 0.88
PPP1CA-211ENST00000546202 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
PPP1CA-211ENST00000546202 UTYO14607 1347 aa20.54■□□□□ 0.88
PPP1CA-211ENST00000546202 MSH5O43196 834 aa20.54■□□□□ 0.88
PPP1CA-211ENST00000546202 PARP10Q53GL7 1025 aa20.54■□□□□ 0.88
PPP1CA-211ENST00000546202 EXOC6Q8TAG9 804 aa20.54■□□□□ 0.88
PPP1CA-211ENST00000546202 MTFR1LQ9H019 292 aa20.54■□□□□ 0.88
PPP1CA-211ENST00000546202 GRM8O00222 908 aa20.53■□□□□ 0.88
PPP1CA-211ENST00000546202 NLGN1Q8N2Q7 840 aa20.53■□□□□ 0.88
PPP1CA-211ENST00000546202 MEIS3Q99687 375 aa20.53■□□□□ 0.88
PPP1CA-211ENST00000546202 CHMP4BQ9H444 224 aaKnown RBP20.53■□□□□ 0.88
PPP1CA-211ENST00000546202 LAMB2P55268 1798 aa20.52■□□□□ 0.88
PPP1CA-211ENST00000546202 NFIXQ14938 502 aa20.52■□□□□ 0.88
PPP1CA-211ENST00000546202 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
PPP1CA-211ENST00000546202 NRXN2Q9P2S2 1712 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 H7C1W4 665 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 GNAI3P08754 354 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 TM4SF1P30408 202 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 AAMPQ13685 434 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 SUSD4Q5VX71 490 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 SLC16A10Q8TF71 515 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 SETDB2Q96T68 719 aa20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 C9orf78Q9NZ63 289 aaPredicted RBP20.51■□□□□ 0.87
PPP1CA-211ENST00000546202 CARMIL3Q8ND23 1372 aa20.5■□□□□ 0.87
PPP1CA-211ENST00000546202 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
PPP1CA-211ENST00000546202 CASP7P55210 303 aa20.5■□□□□ 0.87
PPP1CA-211ENST00000546202 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
PPP1CA-211ENST00000546202 ZBTB38Q8NAP3 1195 aaPredicted RBP20.5■□□□□ 0.87
PPP1CA-211ENST00000546202 UTRNP46939 3433 aa20.5■□□□□ 0.87
PPP1CA-211ENST00000546202 PCCAP05165 728 aaPredicted RBP20.49■□□□□ 0.87
PPP1CA-211ENST00000546202 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
PPP1CA-211ENST00000546202 DDX60Q8IY21 1712 aaKnown RBP20.49■□□□□ 0.87
PPP1CA-211ENST00000546202 MYH3P11055 1940 aa20.49■□□□□ 0.87
PPP1CA-211ENST00000546202 NTSR2O95665 410 aa20.48■□□□□ 0.87
PPP1CA-211ENST00000546202 UBTFL1P0CB47 393 aaPredicted RBP20.48■□□□□ 0.87
PPP1CA-211ENST00000546202 ERICH6BQ5W0A0 696 aa20.48■□□□□ 0.87
PPP1CA-211ENST00000546202 UTP14AQ9BVJ6 771 aaKnown RBP20.48■□□□□ 0.87
PPP1CA-211ENST00000546202 DDR1Q08345 913 aa20.47■□□□□ 0.87
PPP1CA-211ENST00000546202 UBE3BQ7Z3V4 1068 aa20.47■□□□□ 0.87
PPP1CA-211ENST00000546202 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
PPP1CA-211ENST00000546202 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
PPP1CA-211ENST00000546202 CDHR2Q9BYE9 1310 aa20.47■□□□□ 0.87
PPP1CA-211ENST00000546202 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
PPP1CA-211ENST00000546202 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
PPP1CA-211ENST00000546202 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-211ENST00000546202 GNAI2P04899 355 aa20.45■□□□□ 0.86
PPP1CA-211ENST00000546202 IFFO2Q5TF58 517 aa20.45■□□□□ 0.86
PPP1CA-211ENST00000546202 MSL1Q68DK7 614 aa20.45■□□□□ 0.86
PPP1CA-211ENST00000546202 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
PPP1CA-211ENST00000546202 FAM89AQ96GI7 184 aa20.45■□□□□ 0.86
PPP1CA-211ENST00000546202 FAM177BA6PVY3 158 aa20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 TPTE2Q6XPS3 522 aa20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 SYNE4Q8N205 404 aa20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 KAZALD1Q96I82 304 aa20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 SUCLG2Q96I99 432 aa20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
PPP1CA-211ENST00000546202 SERPINB2P05120 415 aa20.43■□□□□ 0.86
PPP1CA-211ENST00000546202 MMP10P09238 476 aa20.43■□□□□ 0.86
PPP1CA-211ENST00000546202 GPR162Q16538 588 aa20.43■□□□□ 0.86
PPP1CA-211ENST00000546202 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
PPP1CA-211ENST00000546202 PLA2G12BQ9BX93 195 aa20.43■□□□□ 0.86
PPP1CA-211ENST00000546202 RIC1Q4ADV7 1423 aa20.43■□□□□ 0.86
PPP1CA-211ENST00000546202 ERFEQ4G0M1 354 aa20.42■□□□□ 0.86
PPP1CA-211ENST00000546202 SLC10A5Q5PT55 438 aa20.42■□□□□ 0.86
PPP1CA-211ENST00000546202 NUTM1Q86Y26 1132 aa20.42■□□□□ 0.86
PPP1CA-211ENST00000546202 C1orf115Q9H7X2 142 aa20.42■□□□□ 0.86
PPP1CA-211ENST00000546202 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 IRS4O14654 1257 aaPredicted RBP20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 FOXO4P98177 505 aa20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 PRR5LQ6MZQ0 368 aa20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 CNBD1Q8NA66 436 aa20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 ABCC12Q96J65 1359 aa20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 TNRC6CQ9HCJ0 1690 aaKnown RBP20.41■□□□□ 0.86
PPP1CA-211ENST00000546202 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
PPP1CA-211ENST00000546202 RABL6Q3YEC7 729 aaPredicted RBP20.4■□□□□ 0.86
PPP1CA-211ENST00000546202 EPHA10Q5JZY3 1008 aa20.4■□□□□ 0.86
PPP1CA-211ENST00000546202 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
PPP1CA-211ENST00000546202 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
PPP1CA-211ENST00000546202 CHD4Q14839 1912 aa20.39■□□□□ 0.86
PPP1CA-211ENST00000546202 PDE8AO60658 829 aa20.39■□□□□ 0.85
PPP1CA-211ENST00000546202 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
PPP1CA-211ENST00000546202 MTX1Q13505 466 aa20.39■□□□□ 0.85
PPP1CA-211ENST00000546202 CEP85Q6P2H3 762 aa20.39■□□□□ 0.85
PPP1CA-211ENST00000546202 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
PPP1CA-211ENST00000546202 HCLS1P14317 486 aaPredicted RBP20.38■□□□□ 0.85
PPP1CA-211ENST00000546202 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms