RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 NBPF7P0C2Y1 421 aaPredicted RBP21.46■■□□□ 1.03
CADM1-220ENST00000546000 HSP90AB3PQ58FF7 597 aa21.46■■□□□ 1.03
CADM1-220ENST00000546000 SYNE4Q8N205 404 aa21.45■■□□□ 1.02
CADM1-220ENST00000546000 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
CADM1-220ENST00000546000 GRM8O00222 908 aa21.44■■□□□ 1.02
CADM1-220ENST00000546000 HMGB2P26583 209 aaKnown RBP21.44■■□□□ 1.02
CADM1-220ENST00000546000 SUSD4Q5VX71 490 aa21.44■■□□□ 1.02
CADM1-220ENST00000546000 UBE3BQ7Z3V4 1068 aa21.44■■□□□ 1.02
CADM1-220ENST00000546000 CCDC191Q8NCU4 936 aa21.44■■□□□ 1.02
CADM1-220ENST00000546000 LRP5O75197 1615 aa21.44■■□□□ 1.02
CADM1-220ENST00000546000 CASP7P55210 303 aa21.43■■□□□ 1.02
CADM1-220ENST00000546000 NFIXQ14938 502 aa21.43■■□□□ 1.02
CADM1-220ENST00000546000 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
CADM1-220ENST00000546000 SUCLG2Q96I99 432 aa21.43■■□□□ 1.02
CADM1-220ENST00000546000 C9orf78Q9NZ63 289 aaPredicted RBP21.43■■□□□ 1.02
CADM1-220ENST00000546000 UBTFL1P0CB47 393 aaPredicted RBP21.42■■□□□ 1.02
CADM1-220ENST00000546000 TRIM28Q13263 835 aaKnown RBP21.42■■□□□ 1.02
CADM1-220ENST00000546000 CASZ1Q86V15 1759 aa21.42■■□□□ 1.02
CADM1-220ENST00000546000 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
CADM1-220ENST00000546000 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
CADM1-220ENST00000546000 LRRFIP2Q9Y608 721 aaKnown RBP21.42■■□□□ 1.02
CADM1-220ENST00000546000 UTYO14607 1347 aa21.41■■□□□ 1.02
CADM1-220ENST00000546000 NTSR2O95665 410 aa21.41■■□□□ 1.02
CADM1-220ENST00000546000 DDR1Q08345 913 aa21.41■■□□□ 1.02
CADM1-220ENST00000546000 R3HDM1Q15032 1099 aaKnown RBP21.41■■□□□ 1.02
CADM1-220ENST00000546000 FAM89AQ96GI7 184 aa21.41■■□□□ 1.02
CADM1-220ENST00000546000 ABCC12Q96J65 1359 aa21.4■■□□□ 1.02
CADM1-220ENST00000546000 IBTKQ9P2D0 1353 aaPredicted RBP21.4■■□□□ 1.02
CADM1-220ENST00000546000 PSDA5PKW4 1024 aaPredicted RBP21.4■■□□□ 1.02
CADM1-220ENST00000546000 RGL2O15211 777 aa21.4■■□□□ 1.02
CADM1-220ENST00000546000 EPHA10Q5JZY3 1008 aa21.4■■□□□ 1.02
CADM1-220ENST00000546000 NUTM1Q86Y26 1132 aa21.4■■□□□ 1.02
CADM1-220ENST00000546000 CCDC24Q8N4L8 307 aa21.4■■□□□ 1.02
CADM1-220ENST00000546000 KAZALD1Q96I82 304 aa21.4■■□□□ 1.02
CADM1-220ENST00000546000 H7C1W4 665 aa21.39■■□□□ 1.01
CADM1-220ENST00000546000 GNAI3P08754 354 aa21.39■■□□□ 1.01
CADM1-220ENST00000546000 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
CADM1-220ENST00000546000 TRMT112Q9UI30 125 aaKnown RBP21.39■■□□□ 1.01
CADM1-220ENST00000546000 DDX60Q8IY21 1712 aaKnown RBP21.38■■□□□ 1.01
CADM1-220ENST00000546000 PCCAP05165 728 aaPredicted RBP21.38■■□□□ 1.01
CADM1-220ENST00000546000 SETDB2Q96T68 719 aa21.38■■□□□ 1.01
CADM1-220ENST00000546000 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
CADM1-220ENST00000546000 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
CADM1-220ENST00000546000 CARMIL3Q8ND23 1372 aa21.37■■□□□ 1.01
CADM1-220ENST00000546000 GNAI2P04899 355 aa21.37■■□□□ 1.01
CADM1-220ENST00000546000 ZBTB38Q8NAP3 1195 aaPredicted RBP21.37■■□□□ 1.01
CADM1-220ENST00000546000 LAMB2P55268 1798 aa21.37■■□□□ 1.01
CADM1-220ENST00000546000 TM4SF1P30408 202 aa21.36■■□□□ 1.01
CADM1-220ENST00000546000 ERFEQ4G0M1 354 aa21.36■■□□□ 1.01
CADM1-220ENST00000546000 B4GALNT3Q6L9W6 998 aa21.36■■□□□ 1.01
CADM1-220ENST00000546000 CEP85Q6P2H3 762 aa21.36■■□□□ 1.01
CADM1-220ENST00000546000 BICC1Q9H694 974 aaKnown RBP21.36■■□□□ 1.01
CADM1-220ENST00000546000 POLRMTO00411 1230 aaKnown RBP21.35■■□□□ 1.01
CADM1-220ENST00000546000 MMP10P09238 476 aa21.35■■□□□ 1.01
CADM1-220ENST00000546000 HCLS1P14317 486 aaPredicted RBP21.35■■□□□ 1.01
CADM1-220ENST00000546000 PPP1R42Q7Z4L9 355 aa21.35■■□□□ 1.01
CADM1-220ENST00000546000 NBPF5PQ86XG9 351 aaPredicted RBP21.35■■□□□ 1.01
CADM1-220ENST00000546000 SIRT2Q8IXJ6 389 aa21.35■■□□□ 1.01
CADM1-220ENST00000546000 ANKRD44Q8N8A2 993 aa21.35■■□□□ 1.01
CADM1-220ENST00000546000 SH3TC1Q8TE82 1336 aa21.34■■□□□ 1.01
CADM1-220ENST00000546000 IRS4O14654 1257 aaPredicted RBP21.34■■□□□ 1.01
CADM1-220ENST00000546000 CDHR2Q9BYE9 1310 aa21.33■■□□□ 1.01
CADM1-220ENST00000546000 ZBTB7AO95365 584 aa21.33■■□□□ 1.01
CADM1-220ENST00000546000 C3orf67Q6ZVT6 689 aa21.33■■□□□ 1.01
CADM1-220ENST00000546000 CCDC85AQ96PX6 553 aaPredicted RBP21.33■■□□□ 1.01
CADM1-220ENST00000546000 CHMP4BQ9H444 224 aaKnown RBP21.33■■□□□ 1.01
CADM1-220ENST00000546000 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
CADM1-220ENST00000546000 PNMA6EA0A0J9YXQ4 647 aa21.32■■□□□ 1
CADM1-220ENST00000546000 SERPINB2P05120 415 aa21.32■■□□□ 1
CADM1-220ENST00000546000 FOXO4P98177 505 aa21.32■■□□□ 1
CADM1-220ENST00000546000 ERICH6BQ5W0A0 696 aa21.32■■□□□ 1
CADM1-220ENST00000546000 PRR5LQ6MZQ0 368 aa21.32■■□□□ 1
CADM1-220ENST00000546000 NLGN1Q8N2Q7 840 aa21.32■■□□□ 1
CADM1-220ENST00000546000 PPP4R2Q9NY27 417 aa21.32■■□□□ 1
CADM1-220ENST00000546000 COL4A1P02462 1669 aa21.31■■□□□ 1
CADM1-220ENST00000546000 IGHDP01880 384 aa21.3■■□□□ 1
CADM1-220ENST00000546000 CNBD1Q8NA66 436 aa21.3■■□□□ 1
CADM1-220ENST00000546000 NYXQ9GZU5 481 aa21.3■■□□□ 1
CADM1-220ENST00000546000 CTSWP56202 376 aa21.29■■□□□ 1
CADM1-220ENST00000546000 LMBR1LQ6UX01 489 aa21.29■■□□□ 1
CADM1-220ENST00000546000 MYH3P11055 1940 aa21.29■■□□□ 1
CADM1-220ENST00000546000 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
CADM1-220ENST00000546000 NPHP1O15259 732 aa21.28■■□□□ 1
CADM1-220ENST00000546000 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
CADM1-220ENST00000546000 AAMPQ13685 434 aa21.28■■□□□ 1
CADM1-220ENST00000546000 FAM161AQ3B820 660 aa21.28■■□□□ 1
CADM1-220ENST00000546000 RABL6Q3YEC7 729 aaPredicted RBP21.28■■□□□ 1
CADM1-220ENST00000546000 CCDC136Q96JN2 1154 aa21.28■■□□□ 1
CADM1-220ENST00000546000 PLA2G12BQ9BX93 195 aa21.28■■□□□ 1
CADM1-220ENST00000546000 ATF5Q9Y2D1 282 aaPredicted RBP21.28■■□□□ 1
CADM1-220ENST00000546000 CHMP3Q9Y3E7 222 aa21.28■■□□□ 1
CADM1-220ENST00000546000 TPTE2Q6XPS3 522 aa21.27■■□□□ 1
CADM1-220ENST00000546000 PARP3Q9Y6F1 533 aa21.27■■□□□ 1
CADM1-220ENST00000546000 SRGAP3O43295 1099 aa21.26■□□□□ 0.99
CADM1-220ENST00000546000 PDE8AO60658 829 aa21.26■□□□□ 0.99
CADM1-220ENST00000546000 ATP8B2P98198 1209 aa21.26■□□□□ 0.99
CADM1-220ENST00000546000 MTX1Q13505 466 aa21.25■□□□□ 0.99
CADM1-220ENST00000546000 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
CADM1-220ENST00000546000 KLHDC4Q8TBB5 520 aa21.25■□□□□ 0.99
CADM1-220ENST00000546000 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms