RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SYAP1Q96A49 352 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-225ENST00000545920 CCDC97Q96F63 343 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-225ENST00000545920 TRAIPQ9BWF2 469 aa7.89□□□□□ -1.15
SNHG1-225ENST00000545920 GZF1Q9H116 711 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-225ENST00000545920 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 TTC21AQ8NDW8 1320 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 SAFB2Q14151 953 aaKnown RBP eCLIP7.88□□□□□ -1.15
SNHG1-225ENST00000545920 CEP85Q6P2H3 762 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 RSBN1LQ6PCB5 846 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-225ENST00000545920 PHACTR3Q96KR7 559 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 NAP1L5Q96NT1 182 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-225ENST00000545920 PANK2Q9BZ23 570 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 SETD1AO15047 1707 aaKnown RBP7.88□□□□□ -1.15
SNHG1-225ENST00000545920 MON2Q7Z3U7 1717 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 RIMBP3CA6NJZ7 1639 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 RIMBP3BA6NNM3 1639 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 RIMBP3Q9UFD9 1639 aa7.88□□□□□ -1.15
SNHG1-225ENST00000545920 RGS12O14924 1447 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 ZNF500O60304 480 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-225ENST00000545920 OFD1O75665 1012 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 GNAI3P08754 354 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 GSPT1P15170 499 aaKnown RBP7.87□□□□□ -1.15
SNHG1-225ENST00000545920 MSNP26038 577 aaKnown RBP7.87□□□□□ -1.15
SNHG1-225ENST00000545920 SULF1Q8IWU6 871 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 FAM184AQ8NB25 1140 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 GAS2L2Q8NHY3 880 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 NECTIN2Q92692 538 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 NUDT16Q96DE0 195 aaKnown RBP7.87□□□□□ -1.15
SNHG1-225ENST00000545920 PDLIM2Q96JY6 352 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 TSR3Q9UJK0 312 aaKnown RBP7.87□□□□□ -1.15
SNHG1-225ENST00000545920 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-225ENST00000545920 PXDNLA1KZ92 1463 aa7.87□□□□□ -1.15
SNHG1-225ENST00000545920 OVOS2A0A0J9YW53 1432 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 OVOS2Q6IE36 1432 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 C3P01024 1663 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 LILRB3O75022 631 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 LETM1O95202 739 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-225ENST00000545920 SSFA2P28290 1259 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 CUL4AQ13619 759 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 HSP90AA2PQ14568 343 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-225ENST00000545920 FAM98CQ17RN3 349 aaKnown RBP7.86□□□□□ -1.15
SNHG1-225ENST00000545920 TSPYL6Q8N831 410 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 C8orf58Q8NAV2 365 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 LMBRD1Q9NUN5 540 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 STAP2Q9UGK3 403 aa7.86□□□□□ -1.15
SNHG1-225ENST00000545920 NOL7Q9UMY1 257 aaKnown RBP7.86□□□□□ -1.15
SNHG1-225ENST00000545920 ZBTB7CA1YPR0 619 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 HMOX1P09601 288 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 SDSP20132 328 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 DNAJB2P25686 324 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 UVSSAQ2YD98 709 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 NUTM2DQ5VT03 806 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-225ENST00000545920 GAS2L3Q86XJ1 694 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNHG1-225ENST00000545920 TMEM134Q9H6X4 195 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-225ENST00000545920 TSKSQ9UJT2 592 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 EMILIN1Q9Y6C2 1016 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 CRB1P82279 1406 aa7.85□□□□□ -1.15
SNHG1-225ENST00000545920 KDRP35968 1356 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 AKAP12Q02952 1782 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 RAB11FIP3O75154 756 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 GNAI2P04899 355 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 PDE1AP54750 535 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 ZSCAN23Q3MJ62 389 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 LRSAM1Q6UWE0 723 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 NME9Q86XW9 330 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 PDCL3Q9H2J4 239 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-225ENST00000545920 HDAC5Q9UQL6 1122 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 PTPRUQ92729 1446 aa7.84□□□□□ -1.15
SNHG1-225ENST00000545920 CFAP65Q6ZU64 1925 aaKnown RBP7.84□□□□□ -1.16
SNHG1-225ENST00000545920 MYO5BQ9ULV0 1848 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 NRXN3Q9Y4C0 1643 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 MOXD2PA6NHM9 499 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 CD2BP2O95400 341 aaKnown RBP7.83□□□□□ -1.16
SNHG1-225ENST00000545920 BRD1O95696 1058 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
SNHG1-225ENST00000545920 EIF4A2Q14240 407 aaKnown RBP7.83□□□□□ -1.16
SNHG1-225ENST00000545920 MCTP1Q6DN14 999 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 NUTM1Q86Y26 1132 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 TMEM87AQ8NBN3 555 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 RTF1Q92541 710 aaKnown RBP7.83□□□□□ -1.16
SNHG1-225ENST00000545920 STK31Q9BXU1 1019 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 GDPD2Q9HCC8 539 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 HPS5Q9UPZ3 1129 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 ATP6V1DQ9Y5K8 247 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 SBNO1A3KN83 1393 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 FLT4P35916 1363 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 MSH6P52701 1360 aa7.83□□□□□ -1.16
SNHG1-225ENST00000545920 MAP2P11137 1827 aaKnown RBP7.82□□□□□ -1.16
SNHG1-225ENST00000545920 SALL3Q9BXA9 1300 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 WDR33Q9C0J8 1336 aaKnown RBP7.82□□□□□ -1.16
SNHG1-225ENST00000545920 LCE2BO14633 110 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 GFRA3O60609 400 aa7.82□□□□□ -1.16
SNHG1-225ENST00000545920 HOXB7P09629 217 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms