RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FOXO3O43524 673 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 AMPD3Q01432 767 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 KSR2Q6VAB6 950 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 ANKRD13DQ6ZTN6 518 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 CKAP2LQ8IYA6 745 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 PAXBP1Q9Y5B6 917 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC171Q6TFL3 1326 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 DESP17661 470 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL4A6-209ENST00000545689 ZSCAN29Q8IWY8 852 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-209ENST00000545689 RAD50Q92878 1312 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 USO1O60763 962 aaKnown RBP14.48□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC178Q5BJE1 867 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC102AQ96A19 550 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 ORC3Q9UBD5 711 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-209ENST00000545689 POLKQ9UBT6 870 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 CRACR2AQ9BSW2 395 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 LDHCP07864 332 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 POTEJP0CG39 1038 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 ZNF165P49910 485 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 NLRP5P59047 1200 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 EIF4A2Q14240 407 aaKnown RBP14.47□□□□□ -0.09
COL4A6-209ENST00000545689 LRRC27Q9C0I9 530 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 RANBP6O60518 1105 aaKnown RBP14.47□□□□□ -0.09
COL4A6-209ENST00000545689 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
COL4A6-209ENST00000545689 ZBTB40Q9NUA8 1239 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 TUBB4AP04350 444 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 CCT2P78371 535 aaKnown RBP14.47□□□□□ -0.09
COL4A6-209ENST00000545689 KCNG4Q8TDN1 519 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 KRT23Q9C075 422 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 BABAM1Q9NWV8 329 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 DYNC1I1O14576 645 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 BICDL1Q6ZP65 573 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 C8orf58Q8NAV2 365 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 EHMT1Q9H9B1 1298 aa14.47□□□□□ -0.09
COL4A6-209ENST00000545689 TMTC2Q8N394 836 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 INTS4Q96HW7 963 aaKnown RBP14.46□□□□□ -0.09
COL4A6-209ENST00000545689 CNNM2Q9H8M5 875 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 GCC2Q8IWJ2 1684 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 VAMP4O75379 141 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 GUCY1B3Q02153 619 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC102BQ68D86 513 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 MFSD6Q6ZSS7 791 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 UBE3BQ7Z3V4 1068 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 RAB3GAP1Q15042 981 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 SEPT7Q16181 437 aaKnown RBP14.46□□□□□ -0.09
COL4A6-209ENST00000545689 CHPF2Q9P2E5 772 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 MAP3K5Q99683 1374 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 LDHAL6AQ6ZMR3 332 aa14.46□□□□□ -0.09
COL4A6-209ENST00000545689 ABCC2Q92887 1545 aa14.46□□□□□ -0.1
COL4A6-209ENST00000545689 PDE4BQ07343 736 aa14.46□□□□□ -0.1
COL4A6-209ENST00000545689 HS1BP3Q53T59 392 aa14.46□□□□□ -0.1
COL4A6-209ENST00000545689 GRM8O00222 908 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
COL4A6-209ENST00000545689 CETN2P41208 172 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 KIF4BQ2VIQ3 1234 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 ADGBQ8N7X0 1667 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 URI1O94763 535 aaPredicted RBP14.45□□□□□ -0.1
COL4A6-209ENST00000545689 MCMDC2Q4G0Z9 681 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 CEP85Q6P2H3 762 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 RMND1Q9NWS8 449 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 IL15P40933 162 aaPredicted RBP14.45□□□□□ -0.1
COL4A6-209ENST00000545689 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 SEPT11Q9NVA2 429 aaKnown RBP14.45□□□□□ -0.1
COL4A6-209ENST00000545689 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
COL4A6-209ENST00000545689 EXOC5O00471 708 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 SKIDA1Q1XH10 827 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
COL4A6-209ENST00000545689 SAMD9Q5K651 1589 aa14.45□□□□□ -0.1
COL4A6-209ENST00000545689 CADPS2Q86UW7 1296 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 F13A1P00488 732 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 KLHL10Q6JEL2 608 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 KLHL34Q8N239 644 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 NUP88Q99567 741 aaPredicted RBP14.44□□□□□ -0.1
COL4A6-209ENST00000545689 CALML4Q96GE6 196 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 CUL5Q93034 780 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 TCP11L1Q9NUJ3 509 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 ANKIB1Q9P2G1 1089 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 CRACR2BQ8N4Y2 399 aaPredicted RBP14.44□□□□□ -0.1
COL4A6-209ENST00000545689 FAM200AQ8TCP9 573 aa14.44□□□□□ -0.1
COL4A6-209ENST00000545689 TFIP11Q9UBB9 837 aaKnown RBP14.44□□□□□ -0.1
COL4A6-209ENST00000545689 CLCN1P35523 988 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 RBM25P49756 843 aaKnown RBP14.43□□□□□ -0.1
COL4A6-209ENST00000545689 EHBP1Q8NDI1 1231 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 GDPD2Q9HCC8 539 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 RBM27Q9P2N5 1060 aaKnown RBP14.43□□□□□ -0.1
COL4A6-209ENST00000545689 PBRM1Q86U86 1689 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 MPHOSPH10O00566 681 aaKnown RBP14.43□□□□□ -0.1
COL4A6-209ENST00000545689 GSTO1P78417 241 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 PLXNC1O60486 1568 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 BAG3O95817 575 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 SNW1Q13573 536 aaKnown RBP14.43□□□□□ -0.1
COL4A6-209ENST00000545689 LINS1Q8NG48 757 aa14.43□□□□□ -0.1
COL4A6-209ENST00000545689 YTHDC2Q9H6S0 1430 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms