RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CTU1Q7Z7A3 348 aaKnown RBP9.89□□□□□ -0.83
COPA-207ENST00000545284 NIM1KQ8IY84 436 aa9.89□□□□□ -0.83
COPA-207ENST00000545284 NYXQ9GZU5 481 aa9.89□□□□□ -0.83
COPA-207ENST00000545284 COL11A2P13942 1736 aaPredicted RBP9.89□□□□□ -0.83
COPA-207ENST00000545284 SCN7AQ01118 1682 aa9.88□□□□□ -0.83
COPA-207ENST00000545284 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
COPA-207ENST00000545284 TMX4Q9H1E5 349 aaPredicted RBP9.88□□□□□ -0.83
COPA-207ENST00000545284 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
COPA-207ENST00000545284 HUNKP57058 714 aa9.87□□□□□ -0.83
COPA-207ENST00000545284 RGMBQ6NW40 437 aa9.87□□□□□ -0.83
COPA-207ENST00000545284 GAS2L2Q8NHY3 880 aa9.87□□□□□ -0.83
COPA-207ENST00000545284 CRAMP1Q96RY5 1269 aa9.87□□□□□ -0.83
COPA-207ENST00000545284 ZNRF3Q9ULT6 936 aa9.87□□□□□ -0.83
COPA-207ENST00000545284 GNAT3A8MTJ3 354 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 TNIP1Q15025 636 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 SUPT20HQ8NEM7 779 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 IL17REQ8NFR9 667 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 RPGRQ92834 1020 aaKnown RBP9.86□□□□□ -0.83
COPA-207ENST00000545284 GLIS2Q9BZE0 524 aaPredicted RBP9.86□□□□□ -0.83
COPA-207ENST00000545284 PANK3Q9H999 370 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 RNF186Q9NXI6 227 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 TIMELESSQ9UNS1 1208 aa9.86□□□□□ -0.83
COPA-207ENST00000545284 RIC1Q4ADV7 1423 aa9.85□□□□□ -0.83
COPA-207ENST00000545284 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
COPA-207ENST00000545284 SNRPA1P09661 255 aaKnown RBP9.85□□□□□ -0.83
COPA-207ENST00000545284 CXCL9Q07325 125 aa9.85□□□□□ -0.83
COPA-207ENST00000545284 HABP4Q5JVS0 413 aaKnown RBP9.85□□□□□ -0.83
COPA-207ENST00000545284 C2orf69Q8N8R5 385 aa9.85□□□□□ -0.83
COPA-207ENST00000545284 RBM17Q96I25 401 aaKnown RBP9.85□□□□□ -0.83
COPA-207ENST00000545284 USP16Q9Y5T5 823 aa9.85□□□□□ -0.83
COPA-207ENST00000545284 UBR2Q8IWV8 1755 aa9.85□□□□□ -0.83
COPA-207ENST00000545284 NPC1L1Q9UHC9 1359 aa9.85□□□□□ -0.83
COPA-207ENST00000545284 BTBD11A6QL63 1104 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 ERVV-1B6SEH8 477 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 H7C1D1 291 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 PPIP5K2O43314 1243 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 TRPA1O75762 1119 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 HMOX1P09601 288 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
COPA-207ENST00000545284 DPF2Q92785 391 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 ZIC5Q96T25 663 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 RTFDC1Q9BY42 306 aaPredicted RBP9.84□□□□□ -0.83
COPA-207ENST00000545284 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 KNSTRNQ9Y448 316 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 CEMIPQ8WUJ3 1361 aa9.84□□□□□ -0.83
COPA-207ENST00000545284 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
COPA-207ENST00000545284 GMPSP49915 693 aaPredicted RBP9.83□□□□□ -0.84
COPA-207ENST00000545284 HIRAP54198 1017 aaPredicted RBP9.83□□□□□ -0.84
COPA-207ENST00000545284 KIF23Q02241 960 aaPredicted RBP9.83□□□□□ -0.84
COPA-207ENST00000545284 BCL2L13Q9BXK5 485 aa9.83□□□□□ -0.84
COPA-207ENST00000545284 ZNF408Q9H9D4 720 aa9.83□□□□□ -0.84
COPA-207ENST00000545284 GBA2Q9HCG7 927 aaPredicted RBP9.83□□□□□ -0.84
COPA-207ENST00000545284 IBTKQ9P2D0 1353 aaPredicted RBP9.83□□□□□ -0.84
COPA-207ENST00000545284 TRPM7Q96QT4 1865 aa9.83□□□□□ -0.84
COPA-207ENST00000545284 CASP8AP2Q9UKL3 1982 aa9.83□□□□□ -0.84
COPA-207ENST00000545284 PPEF1O14829 653 aaPredicted RBP9.82□□□□□ -0.84
COPA-207ENST00000545284 ZNF157P51786 506 aaPredicted RBP9.82□□□□□ -0.84
COPA-207ENST00000545284 CSRNP1Q96S65 589 aa9.82□□□□□ -0.84
COPA-207ENST00000545284 CNOT7Q9UIV1 285 aaKnown RBP9.82□□□□□ -0.84
COPA-207ENST00000545284 ATP6V0A2Q9Y487 856 aa9.82□□□□□ -0.84
COPA-207ENST00000545284 BCORQ6W2J9 1755 aa9.82□□□□□ -0.84
COPA-207ENST00000545284 COL4A5P29400 1685 aa9.81□□□□□ -0.84
COPA-207ENST00000545284 BBOX1O75936 387 aa9.81□□□□□ -0.84
COPA-207ENST00000545284 SLC10A3P09131 477 aa9.81□□□□□ -0.84
COPA-207ENST00000545284 KIAA2012Q0VF49 1180 aa9.81□□□□□ -0.84
COPA-207ENST00000545284 AOC3Q16853 763 aa9.81□□□□□ -0.84
COPA-207ENST00000545284 USP48Q86UV5 1035 aa9.81□□□□□ -0.84
COPA-207ENST00000545284 RPS12P25398 132 aaKnown RBP9.8□□□□□ -0.84
COPA-207ENST00000545284 FKBP1BP68106 108 aa9.8□□□□□ -0.84
COPA-207ENST00000545284 HLFQ16534 295 aa9.8□□□□□ -0.84
COPA-207ENST00000545284 INTS3Q68E01 1043 aaKnown RBP9.8□□□□□ -0.84
COPA-207ENST00000545284 FBXO46Q6PJ61 603 aaPredicted RBP9.8□□□□□ -0.84
COPA-207ENST00000545284 KRT26Q7Z3Y9 468 aa9.8□□□□□ -0.84
COPA-207ENST00000545284 DCPSQ96C86 337 aaKnown RBP9.8□□□□□ -0.84
COPA-207ENST00000545284 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
COPA-207ENST00000545284 POLR3GLQ9BT43 218 aa9.8□□□□□ -0.84
COPA-207ENST00000545284 HDAC9Q9UKV0 1011 aa9.8□□□□□ -0.84
COPA-207ENST00000545284 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
COPA-207ENST00000545284 NBPF26B4DH59 902 aa9.79□□□□□ -0.84
COPA-207ENST00000545284 NBPF10Q6P3W6 841 aaKnown RBP9.79□□□□□ -0.84
COPA-207ENST00000545284 DPP8Q6V1X1 898 aaPredicted RBP9.79□□□□□ -0.84
COPA-207ENST00000545284 SP8Q8IXZ3 490 aa9.79□□□□□ -0.84
COPA-207ENST00000545284 TRPM4Q8TD43 1214 aa9.79□□□□□ -0.84
COPA-207ENST00000545284 KCNQ3O43525 872 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
COPA-207ENST00000545284 SLC10A5Q5PT55 438 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 TMC4Q7Z404 712 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 PPP1R42Q7Z4L9 355 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 NUTM1Q86Y26 1132 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 MICALL2Q8IY33 904 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 CACNA1SQ13698 1873 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 MAP3K15Q6ZN16 1313 aa9.78□□□□□ -0.84
COPA-207ENST00000545284 ABCC12Q96J65 1359 aa9.77□□□□□ -0.84
COPA-207ENST00000545284 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
COPA-207ENST00000545284 PIP4K2AP48426 406 aaPredicted RBP9.77□□□□□ -0.85
COPA-207ENST00000545284 FXR1P51114 621 aaKnown RBP eCLIP9.77□□□□□ -0.857e-7■■■■□ 21.4
COPA-207ENST00000545284 PARP10Q53GL7 1025 aa9.77□□□□□ -0.85
COPA-207ENST00000545284 MPNDQ8N594 471 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms