RNA–Protein interactions for RNA: ENST00000545276.1

LINC02440-201, Transcript of long intergenic non-protein coding RNA 2440, humanhuman

TSL 2 BASIC

Gene LINC02440, Length 680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02440-201ENST00000545276 GPBP1L1Q9HC44 474 aaPredicted RBP18.34■□□□□ 0.53
LINC02440-201ENST00000545276 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.53
LINC02440-201ENST00000545276 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
LINC02440-201ENST00000545276 NFKBIEO00221 500 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 C21orf2O43822 256 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 RASSF7Q02833 373 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 ANKRD13DQ6ZTN6 518 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 TSPYL6Q8N831 410 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
LINC02440-201ENST00000545276 RNF181Q9P0P0 153 aa18.33■□□□□ 0.52
LINC02440-201ENST00000545276 LMNB1P20700 586 aa18.32■□□□□ 0.52
LINC02440-201ENST00000545276 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
LINC02440-201ENST00000545276 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
LINC02440-201ENST00000545276 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
LINC02440-201ENST00000545276 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
LINC02440-201ENST00000545276 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
LINC02440-201ENST00000545276 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
LINC02440-201ENST00000545276 ZNF526Q8TF50 670 aaPredicted RBP18.31■□□□□ 0.52
LINC02440-201ENST00000545276 SLC10A5Q5PT55 438 aa18.3■□□□□ 0.52
LINC02440-201ENST00000545276 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
LINC02440-201ENST00000545276 PHAXQ9H814 394 aaKnown RBP18.3■□□□□ 0.52
LINC02440-201ENST00000545276 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
LINC02440-201ENST00000545276 HOXA10P31260 410 aaPredicted RBP18.29■□□□□ 0.52
LINC02440-201ENST00000545276 CCDC93Q567U6 631 aa18.29■□□□□ 0.52
LINC02440-201ENST00000545276 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
LINC02440-201ENST00000545276 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
LINC02440-201ENST00000545276 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
LINC02440-201ENST00000545276 TAOK3Q9H2K8 898 aa18.29■□□□□ 0.52
LINC02440-201ENST00000545276 SH3TC1Q8TE82 1336 aa18.28■□□□□ 0.52
LINC02440-201ENST00000545276 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
LINC02440-201ENST00000545276 PRELPP51888 382 aa18.28■□□□□ 0.52
LINC02440-201ENST00000545276 NLRP3Q96P20 1036 aa18.28■□□□□ 0.52
LINC02440-201ENST00000545276 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
LINC02440-201ENST00000545276 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.52
LINC02440-201ENST00000545276 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.52
LINC02440-201ENST00000545276 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
LINC02440-201ENST00000545276 CRAMP1Q96RY5 1269 aa18.27■□□□□ 0.52
LINC02440-201ENST00000545276 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
LINC02440-201ENST00000545276 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
LINC02440-201ENST00000545276 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
LINC02440-201ENST00000545276 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
LINC02440-201ENST00000545276 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
LINC02440-201ENST00000545276 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
LINC02440-201ENST00000545276 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
LINC02440-201ENST00000545276 C1QTNF8P60827 252 aa18.25■□□□□ 0.51
LINC02440-201ENST00000545276 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
LINC02440-201ENST00000545276 CC2D2BQ6DHV5 1058 aa18.24■□□□□ 0.51
LINC02440-201ENST00000545276 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
LINC02440-201ENST00000545276 KIF3CO14782 793 aa18.23■□□□□ 0.51
LINC02440-201ENST00000545276 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
LINC02440-201ENST00000545276 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC02440-201ENST00000545276 EXOSC9Q06265 439 aaKnown RBP18.23■□□□□ 0.51
LINC02440-201ENST00000545276 VAMP4O75379 141 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 SYNE4Q8N205 404 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 CCDC191Q8NCU4 936 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 MYD88Q99836 296 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
LINC02440-201ENST00000545276 LRRC37AA6NMS7 1700 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 ABCC4O15439 1325 aa18.22■□□□□ 0.51
LINC02440-201ENST00000545276 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 TAF1P21675 1872 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
LINC02440-201ENST00000545276 PPEF1O14829 653 aaPredicted RBP18.21■□□□□ 0.51
LINC02440-201ENST00000545276 OLFM4Q6UX06 510 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 PSMD1Q99460 953 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 NMRK2Q9NPI5 230 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 MAP3K2Q9Y2U5 619 aa18.21■□□□□ 0.51
LINC02440-201ENST00000545276 MYH3P11055 1940 aa18.2■□□□□ 0.5
LINC02440-201ENST00000545276 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
LINC02440-201ENST00000545276 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
LINC02440-201ENST00000545276 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
LINC02440-201ENST00000545276 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
LINC02440-201ENST00000545276 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
LINC02440-201ENST00000545276 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
LINC02440-201ENST00000545276 FLIIQ13045 1269 aa18.19■□□□□ 0.5
LINC02440-201ENST00000545276 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
LINC02440-201ENST00000545276 G2E3Q7L622 706 aa18.19■□□□□ 0.5
LINC02440-201ENST00000545276 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
LINC02440-201ENST00000545276 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
LINC02440-201ENST00000545276 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
LINC02440-201ENST00000545276 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
LINC02440-201ENST00000545276 GRAPQ13588 217 aa18.18■□□□□ 0.5
LINC02440-201ENST00000545276 SF3B3Q15393 1217 aaKnown RBP18.18■□□□□ 0.5
LINC02440-201ENST00000545276 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
LINC02440-201ENST00000545276 ZNF277Q9NRM2 450 aaPredicted RBP18.18■□□□□ 0.5
LINC02440-201ENST00000545276 ATP6V0A2Q9Y487 856 aa18.18■□□□□ 0.5
LINC02440-201ENST00000545276 BBOX1O75936 387 aa18.17■□□□□ 0.5
LINC02440-201ENST00000545276 TMX4Q9H1E5 349 aaPredicted RBP18.17■□□□□ 0.5
LINC02440-201ENST00000545276 E9PSI1 815 aa18.16■□□□□ 0.5
LINC02440-201ENST00000545276 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
LINC02440-201ENST00000545276 IARSP41252 1262 aaKnown RBP18.16■□□□□ 0.5
LINC02440-201ENST00000545276 FKBP5Q13451 457 aaPredicted RBP18.16■□□□□ 0.5
LINC02440-201ENST00000545276 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
LINC02440-201ENST00000545276 DPY19L2Q6NUT2 758 aa18.16■□□□□ 0.5
LINC02440-201ENST00000545276 TMC4Q7Z404 712 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms