RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
SSPN-208ENST00000544231 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
SSPN-208ENST00000544231 SERPINB2P05120 415 aa18.48■□□□□ 0.55
SSPN-208ENST00000544231 HSP90B1P14625 803 aaKnown RBP18.48■□□□□ 0.55
SSPN-208ENST00000544231 DDR1Q08345 913 aa18.48■□□□□ 0.55
SSPN-208ENST00000544231 PDE3AQ14432 1141 aa18.48■□□□□ 0.55
SSPN-208ENST00000544231 CWF19L2Q2TBE0 894 aaKnown RBP18.48■□□□□ 0.55
SSPN-208ENST00000544231 CNBD1Q8NA66 436 aa18.48■□□□□ 0.55
SSPN-208ENST00000544231 TRMT112Q9UI30 125 aaKnown RBP18.48■□□□□ 0.55
SSPN-208ENST00000544231 PLIN1O60240 522 aa18.47■□□□□ 0.55
SSPN-208ENST00000544231 ST5P78524 1137 aa18.47■□□□□ 0.55
SSPN-208ENST00000544231 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
SSPN-208ENST00000544231 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
SSPN-208ENST00000544231 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
SSPN-208ENST00000544231 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
SSPN-208ENST00000544231 GCKRQ14397 625 aa18.46■□□□□ 0.55
SSPN-208ENST00000544231 ZBTB38Q8NAP3 1195 aaPredicted RBP18.46■□□□□ 0.55
SSPN-208ENST00000544231 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
SSPN-208ENST00000544231 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
SSPN-208ENST00000544231 NTSR2O95665 410 aa18.45■□□□□ 0.54
SSPN-208ENST00000544231 PCCAP05165 728 aaPredicted RBP18.45■□□□□ 0.54
SSPN-208ENST00000544231 ITPRIPQ8IWB1 547 aa18.45■□□□□ 0.54
SSPN-208ENST00000544231 HDAC5Q9UQL6 1122 aa18.45■□□□□ 0.54
SSPN-208ENST00000544231 SUPT16HQ9Y5B9 1047 aaKnown RBP18.45■□□□□ 0.54
SSPN-208ENST00000544231 GRM8O00222 908 aa18.44■□□□□ 0.54
SSPN-208ENST00000544231 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
SSPN-208ENST00000544231 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
SSPN-208ENST00000544231 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
SSPN-208ENST00000544231 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
SSPN-208ENST00000544231 N4BP2Q86UW6 1770 aaPredicted RBP18.43■□□□□ 0.54
SSPN-208ENST00000544231 PTGER2P43116 358 aa18.43■□□□□ 0.54
SSPN-208ENST00000544231 PRR5LQ6MZQ0 368 aa18.43■□□□□ 0.54
SSPN-208ENST00000544231 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
SSPN-208ENST00000544231 SGIP1Q9BQI5 828 aa18.43■□□□□ 0.54
SSPN-208ENST00000544231 RLBP1P12271 317 aa18.42■□□□□ 0.54
SSPN-208ENST00000544231 UBE3BQ7Z3V4 1068 aa18.42■□□□□ 0.54
SSPN-208ENST00000544231 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
SSPN-208ENST00000544231 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
SSPN-208ENST00000544231 H7C1W4 665 aa18.41■□□□□ 0.54
SSPN-208ENST00000544231 GNAI3P08754 354 aa18.41■□□□□ 0.54
SSPN-208ENST00000544231 MVPQ14764 893 aaKnown RBP18.41■□□□□ 0.54
SSPN-208ENST00000544231 NUTM1Q86Y26 1132 aa18.41■□□□□ 0.54
SSPN-208ENST00000544231 PPP1R1BQ9UD71 204 aaPredicted RBP18.41■□□□□ 0.54
SSPN-208ENST00000544231 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
SSPN-208ENST00000544231 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
SSPN-208ENST00000544231 UBTFL1P0CB47 393 aaPredicted RBP18.4■□□□□ 0.54
SSPN-208ENST00000544231 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 SLC10A5Q5PT55 438 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 UTYO14607 1347 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
SSPN-208ENST00000544231 PDE6BP35913 854 aa18.39■□□□□ 0.53
SSPN-208ENST00000544231 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
SSPN-208ENST00000544231 USP44Q9H0E7 712 aa18.39■□□□□ 0.53
SSPN-208ENST00000544231 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
SSPN-208ENST00000544231 C10orf71Q711Q0 1435 aa18.39■□□□□ 0.53
SSPN-208ENST00000544231 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
SSPN-208ENST00000544231 NLRP3Q96P20 1036 aa18.38■□□□□ 0.53
SSPN-208ENST00000544231 ABCC12Q96J65 1359 aa18.38■□□□□ 0.53
SSPN-208ENST00000544231 PDE8AO60658 829 aa18.37■□□□□ 0.53
SSPN-208ENST00000544231 NBPF7P0C2Y1 421 aaPredicted RBP18.37■□□□□ 0.53
SSPN-208ENST00000544231 PLA2G12BQ9BX93 195 aa18.37■□□□□ 0.53
SSPN-208ENST00000544231 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
SSPN-208ENST00000544231 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
SSPN-208ENST00000544231 CASP7P55210 303 aa18.36■□□□□ 0.53
SSPN-208ENST00000544231 CCDC24Q8N4L8 307 aa18.36■□□□□ 0.53
SSPN-208ENST00000544231 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
SSPN-208ENST00000544231 MEIS3Q99687 375 aa18.36■□□□□ 0.53
SSPN-208ENST00000544231 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
SSPN-208ENST00000544231 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
SSPN-208ENST00000544231 LRP5O75197 1615 aa18.34■□□□□ 0.53
SSPN-208ENST00000544231 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
SSPN-208ENST00000544231 GNAI2P04899 355 aa18.34■□□□□ 0.53
SSPN-208ENST00000544231 TGFB2P61812 414 aa18.34■□□□□ 0.53
SSPN-208ENST00000544231 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
SSPN-208ENST00000544231 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.52
SSPN-208ENST00000544231 H0YIN7 160 aa18.33■□□□□ 0.52
SSPN-208ENST00000544231 CTSWP56202 376 aa18.33■□□□□ 0.52
SSPN-208ENST00000544231 SUCLG2Q96I99 432 aa18.33■□□□□ 0.52
SSPN-208ENST00000544231 LAMB2P55268 1798 aa18.32■□□□□ 0.52
SSPN-208ENST00000544231 NEFLP07196 543 aa18.32■□□□□ 0.52
SSPN-208ENST00000544231 AAMPQ13685 434 aa18.32■□□□□ 0.52
SSPN-208ENST00000544231 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
SSPN-208ENST00000544231 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
SSPN-208ENST00000544231 RPGRQ92834 1020 aaKnown RBP18.32■□□□□ 0.52
SSPN-208ENST00000544231 KIF13BQ9NQT8 1826 aa18.31■□□□□ 0.52
SSPN-208ENST00000544231 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
SSPN-208ENST00000544231 CRBNQ96SW2 442 aa18.31■□□□□ 0.52
SSPN-208ENST00000544231 LRRFIP2Q9Y608 721 aaKnown RBP18.31■□□□□ 0.52
SSPN-208ENST00000544231 DDX60Q8IY21 1712 aaKnown RBP18.3■□□□□ 0.52
SSPN-208ENST00000544231 NPR1P16066 1061 aa18.3■□□□□ 0.52
SSPN-208ENST00000544231 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
SSPN-208ENST00000544231 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
SSPN-208ENST00000544231 MASTLQ96GX5 879 aa18.3■□□□□ 0.52
SSPN-208ENST00000544231 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
SSPN-208ENST00000544231 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
SSPN-208ENST00000544231 ZBTB40Q9NUA8 1239 aa18.3■□□□□ 0.52
SSPN-208ENST00000544231 CHMP3Q9Y3E7 222 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms