RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
LSM14A-203ENST00000544216 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 A1BGP04217 495 aa16.69■□□□□ 0.26
LSM14A-203ENST00000544216 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
LSM14A-203ENST00000544216 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
LSM14A-203ENST00000544216 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
LSM14A-203ENST00000544216 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
LSM14A-203ENST00000544216 A0A0D9SFI3 127 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
LSM14A-203ENST00000544216 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
LSM14A-203ENST00000544216 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
LSM14A-203ENST00000544216 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 LARGE1O95461 756 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 BRINP3Q76B58 766 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 RNF214Q8ND24 703 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 UTYO14607 1347 aa16.68■□□□□ 0.26
LSM14A-203ENST00000544216 CREB3L3Q68CJ9 461 aa16.67■□□□□ 0.26
LSM14A-203ENST00000544216 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
LSM14A-203ENST00000544216 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
LSM14A-203ENST00000544216 EPB41L2O43491 1005 aaKnown RBP16.66■□□□□ 0.26
LSM14A-203ENST00000544216 TTC14Q96N46 770 aa16.66■□□□□ 0.26
LSM14A-203ENST00000544216 HIP1O00291 1037 aa16.66■□□□□ 0.26
LSM14A-203ENST00000544216 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
LSM14A-203ENST00000544216 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
LSM14A-203ENST00000544216 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
LSM14A-203ENST00000544216 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
LSM14A-203ENST00000544216 GADD45BO75293 160 aaPredicted RBP16.66■□□□□ 0.26
LSM14A-203ENST00000544216 CHGBP05060 677 aa16.66■□□□□ 0.26
LSM14A-203ENST00000544216 CCDC85AQ96PX6 553 aaPredicted RBP16.66■□□□□ 0.26
LSM14A-203ENST00000544216 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
LSM14A-203ENST00000544216 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 PLBD2Q8NHP8 589 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 RBSNQ9H1K0 784 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 SYT1P21579 422 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 TNNI3KQ59H18 835 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
LSM14A-203ENST00000544216 USP48Q86UV5 1035 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 FPGT-TNNI3KV9GXZ4 949 aa16.65■□□□□ 0.26
LSM14A-203ENST00000544216 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.26
LSM14A-203ENST00000544216 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 FIBPO43427 364 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 STX6O43752 255 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 MBD3O95983 291 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 ZNF589Q86UQ0 364 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-203ENST00000544216 CNPY2Q9Y2B0 182 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 GJB2P29033 226 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 ZNF445P59923 1031 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 STK3Q13188 491 aa16.64■□□□□ 0.25
LSM14A-203ENST00000544216 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-203ENST00000544216 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
LSM14A-203ENST00000544216 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 A0A0G2JS52 829 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 ESPNB1AK53 854 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 SLC27A2O14975 620 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 CCDC129Q6ZRS4 1044 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
LSM14A-203ENST00000544216 ZNF594Q96JF6 807 aaPredicted RBP16.63■□□□□ 0.25
LSM14A-203ENST00000544216 TIMM10P62072 90 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 VPS53Q5VIR6 699 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 SEC62Q99442 399 aaKnown RBP16.62■□□□□ 0.25
LSM14A-203ENST00000544216 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
LSM14A-203ENST00000544216 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 ZSWIM6Q9HCJ5 1215 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 IL2RBP14784 551 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 ME3Q16798 604 aa16.62■□□□□ 0.25
LSM14A-203ENST00000544216 CWC25Q9NXE8 425 aaPredicted RBP16.62■□□□□ 0.25
LSM14A-203ENST00000544216 WDR17Q8IZU2 1322 aa16.61■□□□□ 0.25
LSM14A-203ENST00000544216 PSMA5P28066 241 aa16.61■□□□□ 0.25
LSM14A-203ENST00000544216 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
LSM14A-203ENST00000544216 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
LSM14A-203ENST00000544216 FGD1P98174 961 aa16.61■□□□□ 0.25
LSM14A-203ENST00000544216 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
LSM14A-203ENST00000544216 CCDC173Q0VFZ6 552 aa16.61■□□□□ 0.25
LSM14A-203ENST00000544216 IL17RAQ96F46 866 aa16.6■□□□□ 0.25
LSM14A-203ENST00000544216 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
LSM14A-203ENST00000544216 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
LSM14A-203ENST00000544216 SYAP1Q96A49 352 aaPredicted RBP16.6■□□□□ 0.25
LSM14A-203ENST00000544216 GOLIM4O00461 696 aa16.59■□□□□ 0.25
LSM14A-203ENST00000544216 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
LSM14A-203ENST00000544216 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
LSM14A-203ENST00000544216 ZNF335Q9H4Z2 1342 aaPredicted RBP16.59■□□□□ 0.25
LSM14A-203ENST00000544216 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
LSM14A-203ENST00000544216 ATP5JP18859 108 aa16.59■□□□□ 0.25
LSM14A-203ENST00000544216 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
LSM14A-203ENST00000544216 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
LSM14A-203ENST00000544216 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
LSM14A-203ENST00000544216 TUBGCP6Q96RT7 1819 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms