RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MNS1Q8NEH6 495 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 YY1AP1Q9H869 796 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 RAB11FIP3O75154 756 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 COL9A3Q14050 684 aaPredicted RBP14.87□□□□□ -0.03
SMG8-202ENST00000543872 VPS53Q5VIR6 699 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 ARGLU1Q9NWB6 273 aaPredicted RBP14.87□□□□□ -0.03
SMG8-202ENST00000543872 ZFYVE16Q7Z3T8 1539 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 CREBRFQ8IUR6 639 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 FMNL2Q96PY5 1086 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 LCMT1Q9UIC8 334 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 OS9Q13438 667 aaPredicted RBP14.86□□□□□ -0.03
SMG8-202ENST00000543872 IQCB1Q15051 598 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 DNAI1Q9UI46 699 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMG8-202ENST00000543872 PDCP20941 246 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
SMG8-202ENST00000543872 FAM177A1Q8N128 213 aaPredicted RBP14.86□□□□□ -0.03
SMG8-202ENST00000543872 TXLNBQ8N3L3 684 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 EFCC1Q9HA90 598 aa14.86□□□□□ -0.03
SMG8-202ENST00000543872 ZC3H13Q5T200 1668 aaKnown RBP14.86□□□□□ -0.03
SMG8-202ENST00000543872 ZKSCAN1P17029 563 aaPredicted RBP14.85□□□□□ -0.03
SMG8-202ENST00000543872 FAM193AP78312 1265 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 GNL2Q13823 731 aaKnown RBP14.85□□□□□ -0.03
SMG8-202ENST00000543872 ZSCAN26Q16670 478 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 CLGNO14967 610 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 URI1O94763 535 aaPredicted RBP14.85□□□□□ -0.03
SMG8-202ENST00000543872 UBTFL1P0CB47 393 aaPredicted RBP14.85□□□□□ -0.03
SMG8-202ENST00000543872 CDC25BP30305 580 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 GPS2Q13227 327 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 AOPEPQ8N6M6 819 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 ELP1O95163 1332 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 SMC2O95347 1197 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 OAS2P29728 719 aaKnown RBP14.85□□□□□ -0.03
SMG8-202ENST00000543872 GTF2A1P52655 376 aaPredicted RBP14.85□□□□□ -0.03
SMG8-202ENST00000543872 VWDEQ8N2E2 1590 aa14.85□□□□□ -0.03
SMG8-202ENST00000543872 KIF2AO00139 706 aaPredicted RBP14.84□□□□□ -0.03
SMG8-202ENST00000543872 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 RHPN1Q8TCX5 695 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 GLI2P10070 1586 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 FOXO3O43524 673 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 E4F1Q66K89 784 aaPredicted RBP14.84□□□□□ -0.03
SMG8-202ENST00000543872 TMC6Q7Z403 805 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 PPP1R42Q7Z4L9 355 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 PI4K2BQ8TCG2 481 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 COG3Q96JB2 828 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 PPP1R13BQ96KQ4 1090 aa14.84□□□□□ -0.03
SMG8-202ENST00000543872 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
SMG8-202ENST00000543872 MYO1CO00159 1063 aa14.83□□□□□ -0.03
SMG8-202ENST00000543872 LMAN1P49257 510 aa14.83□□□□□ -0.03
SMG8-202ENST00000543872 FLIIQ13045 1269 aa14.83□□□□□ -0.03
SMG8-202ENST00000543872 ZSWIM6Q9HCJ5 1215 aa14.83□□□□□ -0.03
SMG8-202ENST00000543872 H3BQV1 296 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 IFFO2Q5TF58 517 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 CD163L1Q9NR16 1453 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 TTC21AQ8NDW8 1320 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 STX1AQ16623 288 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 NFATC2IPQ8NCF5 419 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 CARD6Q9BX69 1037 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 CAMSAP1Q5T5Y3 1602 aa14.83□□□□□ -0.04
SMG8-202ENST00000543872 ABCC3O15438 1527 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 DHX16O60231 1041 aaKnown RBP14.82□□□□□ -0.04
SMG8-202ENST00000543872 NOP2P46087 812 aaKnown RBP14.82□□□□□ -0.04
SMG8-202ENST00000543872 IDI1Q13907 227 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 RBM43Q6ZSC3 357 aaKnown RBP14.82□□□□□ -0.04
SMG8-202ENST00000543872 RUFY2Q8WXA3 655 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 JAK2O60674 1132 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 PPFIA3O75145 1194 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 SARM1Q6SZW1 724 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 CCAR1Q8IX12 1150 aaKnown RBP14.82□□□□□ -0.04
SMG8-202ENST00000543872 L2HGDHQ9H9P8 463 aa14.82□□□□□ -0.04
SMG8-202ENST00000543872 ORC3Q9UBD5 711 aaPredicted RBP14.82□□□□□ -0.04
SMG8-202ENST00000543872 RBM8AQ9Y5S9 174 aaKnown RBP14.82□□□□□ -0.04
SMG8-202ENST00000543872 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
SMG8-202ENST00000543872 ATP7AQ04656 1500 aa14.81□□□□□ -0.04
SMG8-202ENST00000543872 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
SMG8-202ENST00000543872 EPB41L2O43491 1005 aaKnown RBP14.81□□□□□ -0.04
SMG8-202ENST00000543872 FTOQ9C0B1 505 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMG8-202ENST00000543872 NPATQ14207 1427 aa14.81□□□□□ -0.04
SMG8-202ENST00000543872 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
SMG8-202ENST00000543872 SFPQP23246 707 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMG8-202ENST00000543872 SOS1Q07889 1333 aaPredicted RBP14.81□□□□□ -0.04
SMG8-202ENST00000543872 CPSF1Q10570 1443 aaKnown RBP14.81□□□□□ -0.04
SMG8-202ENST00000543872 SMC1AQ14683 1233 aaKnown RBP14.8□□□□□ -0.04
SMG8-202ENST00000543872 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 NCKAP5LQ9HCH0 1330 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 EFCAB6Q5THR3 1501 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 KINO60870 393 aaKnown RBP14.8□□□□□ -0.04
SMG8-202ENST00000543872 ZRANB2O95218 330 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMG8-202ENST00000543872 GSDMDP57764 484 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 CREB3L3Q68CJ9 461 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 BLOC1S2Q6QNY1 142 aa14.8□□□□□ -0.04
SMG8-202ENST00000543872 CCDC73Q6ZRK6 1079 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms