RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 PHACTR2O75167 634 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 ATF3P18847 181 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 CDR1P51861 262 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 UBASH3AP57075 661 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 CT47A1Q5JQC4 288 aaPredicted RBP16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 SYT10Q6XYQ8 523 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 COL17A1Q9UMD9 1497 aaPredicted RBP16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 METTL24Q5JXM2 366 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 Q6ZUG5 572 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 TIGD1Q96MW7 591 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 TMX4Q9H1E5 349 aaPredicted RBP16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 ZBTB3Q9H5J0 574 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 NPHP3Q7Z494 1330 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 NSD2O96028 1365 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 ODF2Q5BJF6 829 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 ACEP12821 1306 aa16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 ZNF213O14771 459 aa16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 LRP2BPQ9P2M1 347 aa16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 NMIQ13287 307 aaPredicted RBP16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 KIF6Q6ZMV9 814 aa16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 IPO4Q8TEX9 1081 aaKnown RBP16.03■□□□□ 0.16
RPS6KC1-206ENST00000543354 SLU7O95391 586 aaKnown RBP16.02■□□□□ 0.16
RPS6KC1-206ENST00000543354 TOM1L2Q6ZVM7 507 aa16.02■□□□□ 0.16
RPS6KC1-206ENST00000543354 FAM135AQ9P2D6 1515 aa16.02■□□□□ 0.16
RPS6KC1-206ENST00000543354 PNMA6EA0A0J9YXQ4 647 aa16.02■□□□□ 0.16
RPS6KC1-206ENST00000543354 PALD1Q9ULE6 856 aa16.02■□□□□ 0.16
RPS6KC1-206ENST00000543354 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
RPS6KC1-206ENST00000543354 ATP2B2Q01814 1243 aa16.02■□□□□ 0.15
RPS6KC1-206ENST00000543354 STIM1Q13586 685 aa16.02■□□□□ 0.15
RPS6KC1-206ENST00000543354 GPT2Q8TD30 523 aa16.02■□□□□ 0.15
RPS6KC1-206ENST00000543354 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 KIF14Q15058 1648 aa16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 MATR3P43243 847 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■□□ 17.1
RPS6KC1-206ENST00000543354 SLC39A6Q13433 755 aa16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 TAX1BP1Q86VP1 789 aa16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 MYRIPQ8NFW9 859 aa16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 KLF18A0A0U1RQI7 1052 aa16.01■□□□□ 0.15
RPS6KC1-206ENST00000543354 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
RPS6KC1-206ENST00000543354 SYKP43405 635 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 NAPBQ9H115 298 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 MSH6P52701 1360 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
RPS6KC1-206ENST00000543354 LRMPQ12912 555 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 ZNF521Q96K83 1311 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 A0A1B0GVL5 298 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 HMGB1P09429 215 aaKnown RBP16■□□□□ 0.15
RPS6KC1-206ENST00000543354 IKQ13123 557 aaPredicted RBP16■□□□□ 0.15
RPS6KC1-206ENST00000543354 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 A0A1W2PP64 1363 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 ATP10BO94823 1461 aa16■□□□□ 0.15
RPS6KC1-206ENST00000543354 ARFGAP3Q9NP61 516 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 UHRF1BP1Q6BDS2 1440 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 GOLGA6L10A6NI86 522 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 ZSCAN16Q9H4T2 348 aaPredicted RBP15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 BCL2L12Q9HB09 334 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 A2MP01023 1474 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 APOBRQ0VD83 1088 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 KARSQ15046 597 aaKnown RBP15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 CCDC102BQ68D86 513 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 NDUFB9Q9Y6M9 179 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 PPP1R9BQ96SB3 815 aa15.99■□□□□ 0.15
RPS6KC1-206ENST00000543354 GPTP24298 496 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 CEBPAP49715 358 aaPredicted RBP15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 FAM107BQ9H098 131 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 AFMP43652 599 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 SMARCC1Q92922 1105 aaPredicted RBP15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 PIK3R4Q99570 1358 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 CAVIN2O95810 425 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 SMAP1Q8IYB5 467 aaPredicted RBP15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 CCDC148Q8NFR7 591 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 AMOTL2Q9Y2J4 779 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 SLC12A7Q9Y666 1083 aa15.98■□□□□ 0.15
RPS6KC1-206ENST00000543354 GPATCH11Q8N954 259 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 RXRAP19793 462 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 SLC26A6Q9BXS9 759 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 RANBP6O60518 1105 aaKnown RBP15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 BRD1O95696 1058 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 ZSCAN25Q6NSZ9 544 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 GTPBP4Q9BZE4 634 aaKnown RBP15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 LZTFL1Q9NQ48 299 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 SNX14Q9Y5W7 946 aa15.97■□□□□ 0.15
RPS6KC1-206ENST00000543354 ELF2Q15723 593 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms