RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 NMIQ13287 307 aaPredicted RBP15.44■□□□□ 0.06
PTCD2-212ENST00000543322 MTERF4Q7Z6M4 381 aaKnown RBP15.44■□□□□ 0.06
PTCD2-212ENST00000543322 LRRC59Q96AG4 307 aaKnown RBP15.44■□□□□ 0.06
PTCD2-212ENST00000543322 SPTLC3Q9NUV7 552 aa15.44■□□□□ 0.06
PTCD2-212ENST00000543322 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
PTCD2-212ENST00000543322 C5P01031 1676 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 SASH1O94885 1247 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 CWF19L2Q2TBE0 894 aaKnown RBP15.43■□□□□ 0.06
PTCD2-212ENST00000543322 GIMAP6Q6P9H5 292 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 MYRIPQ8NFW9 859 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 LINS1Q8NG48 757 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 KAZALD1Q96I82 304 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 SUCLG2Q96I99 432 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 SLC27A2O14975 620 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 FAM227BQ96M60 508 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 ALDH8A1Q9H2A2 487 aaPredicted RBP15.43■□□□□ 0.06
PTCD2-212ENST00000543322 ELP1O95163 1332 aa15.43■□□□□ 0.06
PTCD2-212ENST00000543322 VPS37CA5D8V6 355 aaPredicted RBP15.42■□□□□ 0.06
PTCD2-212ENST00000543322 GRM8O00222 908 aa15.42■□□□□ 0.06
PTCD2-212ENST00000543322 PSMA5P28066 241 aa15.42■□□□□ 0.06
PTCD2-212ENST00000543322 NOLC1Q14978 699 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTCD2-212ENST00000543322 C1orf141Q5JVX7 400 aa15.42■□□□□ 0.06
PTCD2-212ENST00000543322 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
PTCD2-212ENST00000543322 NECAB1Q8N987 351 aa15.41■□□□□ 0.06
PTCD2-212ENST00000543322 EAF2Q96CJ1 260 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-212ENST00000543322 ZNF830Q96NB3 372 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-212ENST00000543322 BICC1Q9H694 974 aaKnown RBP15.41■□□□□ 0.06
PTCD2-212ENST00000543322 TTC12Q9H892 705 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-212ENST00000543322 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-212ENST00000543322 A0A0D9SFI3 127 aa15.4■□□□□ 0.06
PTCD2-212ENST00000543322 AP5Z1O43299 807 aa15.4■□□□□ 0.06
PTCD2-212ENST00000543322 KRT85P78386 507 aa15.4■□□□□ 0.06
PTCD2-212ENST00000543322 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTCD2-212ENST00000543322 ANKRD1Q15327 319 aa15.4■□□□□ 0.06
PTCD2-212ENST00000543322 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
PTCD2-212ENST00000543322 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
PTCD2-212ENST00000543322 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
PTCD2-212ENST00000543322 PRAMEF22A3QJZ6 481 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 CCDC192P0DO97 292 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 PDCP20941 246 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 GTF2F1P35269 517 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 KCNJ4P48050 445 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 MPNDQ8N594 471 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 TLR7Q9NYK1 1049 aaKnown RBP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 ZNF142P52746 1687 aaPredicted RBP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 DDX58O95786 925 aaKnown RBP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 TPM3P06753 285 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 RPS6KB1P23443 525 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 HMGN5P82970 282 aaKnown RBP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 RNF20Q5VTR2 975 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 ARHGEF25Q86VW2 580 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
PTCD2-212ENST00000543322 ZMYND15Q9H091 742 aa15.39■□□□□ 0.05
PTCD2-212ENST00000543322 DTNBO60941 627 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 COL9A3Q14050 684 aaPredicted RBP15.38■□□□□ 0.05
PTCD2-212ENST00000543322 TSGA10IPQ3SY00 556 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
PTCD2-212ENST00000543322 HMG20BQ9P0W2 317 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
PTCD2-212ENST00000543322 PDIA6Q15084 440 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 FSD1Q9BTV5 496 aa15.38■□□□□ 0.05
PTCD2-212ENST00000543322 RFX7Q2KHR2 1363 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 PSME1Q06323 249 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 MAP3K11Q16584 847 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 DNTTIP2Q5QJE6 756 aaKnown RBP15.37■□□□□ 0.05
PTCD2-212ENST00000543322 FAM200AQ8TCP9 573 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 NUP62CLQ9H1M0 184 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 KCNF1Q9H3M0 494 aa15.37■□□□□ 0.05
PTCD2-212ENST00000543322 C17orf53Q8N3J3 647 aaPredicted RBP15.36■□□□□ 0.05
PTCD2-212ENST00000543322 ANKRD24Q8TF21 1146 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 TAF6LQ9Y6J9 622 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 LIG1P18858 919 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 RBM43Q6ZSC3 357 aaKnown RBP15.36■□□□□ 0.05
PTCD2-212ENST00000543322 ZNF589Q86UQ0 364 aaPredicted RBP15.36■□□□□ 0.05
PTCD2-212ENST00000543322 KIAA1524Q8TCG1 905 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 BOLA2Q9H3K6 86 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 MRVI1Q9Y6F6 885 aa15.36■□□□□ 0.05
PTCD2-212ENST00000543322 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
PTCD2-212ENST00000543322 AFDNP55196 1824 aaKnown RBP15.35■□□□□ 0.05
PTCD2-212ENST00000543322 GCP02774 474 aa15.35■□□□□ 0.05
PTCD2-212ENST00000543322 TYRO3Q06418 890 aa15.35■□□□□ 0.05
PTCD2-212ENST00000543322 ESCO1Q5FWF5 840 aa15.35■□□□□ 0.05
PTCD2-212ENST00000543322 FERMT3Q86UX7 667 aa15.35■□□□□ 0.05
PTCD2-212ENST00000543322 SCAND2PQ9GZW5 306 aaPredicted RBP15.35■□□□□ 0.05
PTCD2-212ENST00000543322 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
PTCD2-212ENST00000543322 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
PTCD2-212ENST00000543322 NPHP3Q7Z494 1330 aa15.34■□□□□ 0.05
PTCD2-212ENST00000543322 GOLGA6L6A8MZA4 724 aa15.34■□□□□ 0.05
PTCD2-212ENST00000543322 TAF5LO75529 589 aa15.34■□□□□ 0.05
PTCD2-212ENST00000543322 SIL1Q9H173 461 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms