RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
MDM2-229ENST00000543046 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
MDM2-229ENST00000543046 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
MDM2-229ENST00000543046 PRR12Q9ULL5 1215 aa7.51□□□□□ -1.21
MDM2-229ENST00000543046 GRNP28799 593 aaKnown RBP7.5□□□□□ -1.21
MDM2-229ENST00000543046 SERPINB4P48594 390 aa7.5□□□□□ -1.21
MDM2-229ENST00000543046 SPEM2Q0P670 501 aa7.5□□□□□ -1.21
MDM2-229ENST00000543046 TXNDC2Q86VQ3 553 aa7.5□□□□□ -1.21
MDM2-229ENST00000543046 ACDQ96AP0 544 aa7.5□□□□□ -1.21
MDM2-229ENST00000543046 SLC30A3Q99726 388 aa7.5□□□□□ -1.21
MDM2-229ENST00000543046 TRAIPQ9BWF2 469 aa7.5□□□□□ -1.21
MDM2-229ENST00000543046 OXCT2Q9BYC2 517 aaPredicted RBP7.5□□□□□ -1.21
MDM2-229ENST00000543046 ZBTB39O15060 712 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 ARAFP10398 606 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 MPSTP25325 297 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 ZAP70P43403 619 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 ZNF211Q13398 564 aaPredicted RBP7.49□□□□□ -1.21
MDM2-229ENST00000543046 ZNF468Q5VIY5 522 aaPredicted RBP7.49□□□□□ -1.21
MDM2-229ENST00000543046 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 RGL4Q8IZJ4 473 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 WHAMMQ8TF30 809 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 GDF2Q9UK05 429 aaPredicted RBP7.49□□□□□ -1.21
MDM2-229ENST00000543046 USP20Q9Y2K6 914 aa7.49□□□□□ -1.21
MDM2-229ENST00000543046 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 ZNF385CQ66K41 422 aaPredicted RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 RAB44Q7Z6P3 723 aaPredicted RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 CMTR1Q8N1G2 835 aaKnown RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 SVOPQ8N4V2 548 aa7.48□□□□□ -1.21
MDM2-229ENST00000543046 GOLGA6L1Q8N7Z2 621 aa7.48□□□□□ -1.21
MDM2-229ENST00000543046 CCER1Q8TC90 406 aaPredicted RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 AVENQ9NQS1 362 aaPredicted RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 RTCBQ9Y3I0 505 aaKnown RBP7.48□□□□□ -1.21
MDM2-229ENST00000543046 ADH6P28332 368 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 PCBP4P57723 403 aaKnown RBP7.47□□□□□ -1.21
MDM2-229ENST00000543046 FKBP4Q02790 459 aaKnown RBP eCLIP7.47□□□□□ -1.21
MDM2-229ENST00000543046 NEUROD1Q13562 356 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 NOM1Q5C9Z4 860 aaKnown RBP7.47□□□□□ -1.21
MDM2-229ENST00000543046 SYT9Q86SS6 491 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 GSX2Q9BZM3 304 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 FAM13BQ9NYF5 915 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 EGFL7Q9UHF1 273 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 KLF15Q9UIH9 416 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 GGA1Q9UJY5 639 aa7.47□□□□□ -1.21
MDM2-229ENST00000543046 NEURL1BA8MQ27 555 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 FAM13AO94988 1023 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 BCRP11274 1271 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
MDM2-229ENST00000543046 NPR3P17342 541 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 EIF1AXP47813 144 aaKnown RBP7.46□□□□□ -1.22
MDM2-229ENST00000543046 CCINQ13939 588 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 SLCO4C1Q6ZQN7 724 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 ATCAYQ86WG3 371 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 GPR152Q8TDT2 470 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 BHMTQ93088 406 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 C11orf16Q9NQ32 467 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
MDM2-229ENST00000543046 H3BRB1 525 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 OIP5O43482 229 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 ICMTO60725 284 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 MAP3K10Q02779 954 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 C1orf229Q6ZS94 237 aaPredicted RBP7.45□□□□□ -1.22
MDM2-229ENST00000543046 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 TUT1Q9H6E5 874 aaKnown RBP7.45□□□□□ -1.22
MDM2-229ENST00000543046 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 LRRC4BQ9NT99 713 aa7.45□□□□□ -1.22
MDM2-229ENST00000543046 GNEQ9Y223 722 aaKnown RBP7.45□□□□□ -1.22
MDM2-229ENST00000543046 SIN3BO75182 1162 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 XYLBO75191 536 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 EGFRP00533 1210 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 NFKB1P19838 968 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 ALKBH2Q6NS38 261 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 KRT25Q7Z3Z0 450 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 FCHSD1Q86WN1 690 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 GLYCTKQ8IVS8 523 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 GALNT6Q8NCL4 622 aa7.44□□□□□ -1.22
MDM2-229ENST00000543046 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.44□□□□□ -1.22
MDM2-229ENST00000543046 KCNA1Q09470 495 aa7.43□□□□□ -1.22
MDM2-229ENST00000543046 TRIP4Q15650 581 aaPredicted RBP7.43□□□□□ -1.22
MDM2-229ENST00000543046 EDARADDQ8WWZ3 215 aa7.43□□□□□ -1.22
MDM2-229ENST00000543046 EDEM1Q92611 657 aa7.43□□□□□ -1.22
MDM2-229ENST00000543046 SHISA8B8ZZ34 492 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 SASH3O75995 380 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 ARHGEF15O94989 841 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 EPXP11678 715 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 TARSP26639 723 aaKnown RBP7.42□□□□□ -1.22
MDM2-229ENST00000543046 DNM1Q05193 864 aaKnown RBP7.42□□□□□ -1.22
MDM2-229ENST00000543046 AAMPQ13685 434 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 TNFRSF25Q93038 417 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
MDM2-229ENST00000543046 ENAMQ9NRM1 1142 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 ZFATQ9P243 1243 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
MDM2-229ENST00000543046 FAM181BA6NEQ2 426 aa7.41□□□□□ -1.22
MDM2-229ENST00000543046 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
MDM2-229ENST00000543046 PDGFAP04085 211 aa7.41□□□□□ -1.22
MDM2-229ENST00000543046 RARAP10276 462 aa7.41□□□□□ -1.22
MDM2-229ENST00000543046 MZF1P28698 734 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms