RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 ZNF530Q6P9A1 599 aaPredicted RBP12.92□□□□□ -0.34
CALU-206ENST00000542996 GJB4Q9NTQ9 266 aa12.92□□□□□ -0.34
CALU-206ENST00000542996 WTIPA6NIX2 430 aaPredicted RBP12.91□□□□□ -0.34
CALU-206ENST00000542996 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 SMIM22K7EJ46 135 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 JAK2O60674 1132 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 LAMB4A4D0S4 1761 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 MYL6BP14649 208 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
CALU-206ENST00000542996 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
CALU-206ENST00000542996 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
CALU-206ENST00000542996 LIG1P18858 919 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
CALU-206ENST00000542996 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 TTC6Q86TZ1 520 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 MST1RQ04912 1400 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
CALU-206ENST00000542996 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
CALU-206ENST00000542996 ATG9AQ7Z3C6 839 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 LRRC2Q9BYS8 371 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 ABCA3Q99758 1704 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 PGBD1Q96JS3 809 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
CALU-206ENST00000542996 L1TD1Q5T7N2 865 aaKnown RBP12.89□□□□□ -0.35
CALU-206ENST00000542996 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 CCDC83Q8IWF9 413 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 BOLA2Q9H3K6 86 aa12.89□□□□□ -0.35
CALU-206ENST00000542996 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
CALU-206ENST00000542996 FOXO4P98177 505 aa12.88□□□□□ -0.35
CALU-206ENST00000542996 SCARF1Q14162 830 aa12.88□□□□□ -0.35
CALU-206ENST00000542996 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
CALU-206ENST00000542996 CASZ1Q86V15 1759 aa12.88□□□□□ -0.35
CALU-206ENST00000542996 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
CALU-206ENST00000542996 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
CALU-206ENST00000542996 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
CALU-206ENST00000542996 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
CALU-206ENST00000542996 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
CALU-206ENST00000542996 COPS6Q7L5N1 327 aa12.87□□□□□ -0.35
CALU-206ENST00000542996 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
CALU-206ENST00000542996 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
CALU-206ENST00000542996 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
CALU-206ENST00000542996 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
CALU-206ENST00000542996 GNAI3P08754 354 aa12.87□□□□□ -0.35
CALU-206ENST00000542996 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
CALU-206ENST00000542996 XAGE3Q8WTP9 111 aa12.87□□□□□ -0.35
CALU-206ENST00000542996 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
CALU-206ENST00000542996 PHKG2P15735 406 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
CALU-206ENST00000542996 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.355e-8■□□□□ 10.9
CALU-206ENST00000542996 SLC27A2O14975 620 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
CALU-206ENST00000542996 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
CALU-206ENST00000542996 STRCQ7RTU9 1775 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 TAF5LO75529 589 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 GCKRQ14397 625 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 STK31Q9BXU1 1019 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 NRBP1Q9UHY1 535 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 CYP21A2P08686 494 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 LRRC24Q50LG9 513 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 GBP4Q96PP9 640 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
CALU-206ENST00000542996 ITGB4P16144 1822 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
CALU-206ENST00000542996 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 PYCARDQ9ULZ3 195 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
CALU-206ENST00000542996 C4AP0C0L4 1744 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 SNAP23O00161 211 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 RBM10P98175 930 aaKnown RBP12.85□□□□□ -0.35
CALU-206ENST00000542996 TFCP2Q12800 502 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 ARID5BQ14865 1188 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 GRM8O00222 908 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 REC8O95072 547 aa12.85□□□□□ -0.35
CALU-206ENST00000542996 FANCGO15287 622 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 GJB2P29033 226 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
CALU-206ENST00000542996 PSME1Q06323 249 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 NAA30Q147X3 362 aaPredicted RBP12.84□□□□□ -0.35
CALU-206ENST00000542996 CHST3Q7LGC8 479 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 CCDC171Q6TFL3 1326 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 ANAPC15P60006 121 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 TIMM10P62072 90 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
CALU-206ENST00000542996 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.35
CALU-206ENST00000542996 KIAA1211Q6ZU35 1233 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms