RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 ZCRB1Q8TBF4 217 aaKnown RBP16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 BRD1O95696 1058 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 AK2P54819 239 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 GPT2Q8TD30 523 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
SLC3A2-220ENST00000542922 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 A0A087WZG4 1122 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 CASP7P55210 303 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 CAVIN1Q6NZI2 390 aaKnown RBP16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 NDUFB9Q9Y6M9 179 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 TJP1Q07157 1748 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 LARGE1O95461 756 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 A1BGP04217 495 aa16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 NSFL1CQ9UNZ2 370 aaKnown RBP16.53■□□□□ 0.24
SLC3A2-220ENST00000542922 TOGARAM1Q9Y4F4 1720 aa16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 CASTP20810 708 aaKnown RBP16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 TFCP2Q12800 502 aa16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 FOXD4L6Q3SYB3 417 aaPredicted RBP16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 FOXD4L3Q6VB84 417 aaPredicted RBP16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 PLBD2Q8NHP8 589 aa16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.24
SLC3A2-220ENST00000542922 CHGBP05060 677 aa16.51■□□□□ 0.23
SLC3A2-220ENST00000542922 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
SLC3A2-220ENST00000542922 RUFY2Q8WXA3 655 aa16.51■□□□□ 0.23
SLC3A2-220ENST00000542922 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
SLC3A2-220ENST00000542922 CCDC171Q6TFL3 1326 aa16.51■□□□□ 0.23
SLC3A2-220ENST00000542922 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
SLC3A2-220ENST00000542922 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 RRAGDQ9NQL2 400 aaPredicted RBP16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 TAF6LQ9Y6J9 622 aa16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 TCHHQ07283 1943 aa16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 IL2RBP14784 551 aa16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
SLC3A2-220ENST00000542922 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
SLC3A2-220ENST00000542922 TNNI3KQ59H18 835 aa16.49■□□□□ 0.23
SLC3A2-220ENST00000542922 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
SLC3A2-220ENST00000542922 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
SLC3A2-220ENST00000542922 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
SLC3A2-220ENST00000542922 FPGT-TNNI3KV9GXZ4 949 aa16.49■□□□□ 0.23
SLC3A2-220ENST00000542922 FOXO4P98177 505 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 DBNDD2Q9BQY9 259 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 GDPD2Q9HCC8 539 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 MED23Q9ULK4 1368 aa16.48■□□□□ 0.23
SLC3A2-220ENST00000542922 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 KCNB2Q92953 911 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 COL15A1P39059 1388 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 KDM4FA0A1W2PPD8 638 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 ST3GAL1Q11201 340 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
SLC3A2-220ENST00000542922 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
SLC3A2-220ENST00000542922 H7C1W4 665 aa16.46■□□□□ 0.23
SLC3A2-220ENST00000542922 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
SLC3A2-220ENST00000542922 PDRG1Q9NUG6 133 aa16.46■□□□□ 0.23
SLC3A2-220ENST00000542922 SLC27A2O14975 620 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 KCNJ4P48050 445 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 EVA1CP58658 441 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 ZNF445P59923 1031 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
SLC3A2-220ENST00000542922 ATP5JP18859 108 aa16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 NHSL1Q5SYE7 1610 aa16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 HIP1O00291 1037 aa16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 CCDC129Q6ZRS4 1044 aa16.44■□□□□ 0.22
SLC3A2-220ENST00000542922 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms