RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
LDB3-207ENST00000542786 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
LDB3-207ENST00000542786 SLIT2O94813 1529 aa17.24■□□□□ 0.35
LDB3-207ENST00000542786 HSPA4P34932 840 aa17.24■□□□□ 0.35
LDB3-207ENST00000542786 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
LDB3-207ENST00000542786 LMBR1LQ6UX01 489 aa17.24■□□□□ 0.35
LDB3-207ENST00000542786 EXOC5O00471 708 aa17.23■□□□□ 0.35
LDB3-207ENST00000542786 CYP19A1P11511 503 aaPredicted RBP17.23■□□□□ 0.35
LDB3-207ENST00000542786 MCM4P33991 863 aa17.23■□□□□ 0.35
LDB3-207ENST00000542786 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
LDB3-207ENST00000542786 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
LDB3-207ENST00000542786 TFCP2Q12800 502 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 SNRKQ9NRH2 765 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 THRAP3Q9Y2W1 955 aaKnown RBP17.22■□□□□ 0.35
LDB3-207ENST00000542786 ST18O60284 1047 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 MCCP23508 829 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 ATG9AQ7Z3C6 839 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
LDB3-207ENST00000542786 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 CICQ96RK0 1608 aaPredicted RBP17.22■□□□□ 0.35
LDB3-207ENST00000542786 SPATA31A5Q5VU36 1347 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 SPATA31A7Q8IWB4 1347 aa17.22■□□□□ 0.35
LDB3-207ENST00000542786 ADAMTS2O95450 1211 aa17.21■□□□□ 0.35
LDB3-207ENST00000542786 STARD3NLO95772 234 aa17.21■□□□□ 0.35
LDB3-207ENST00000542786 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
LDB3-207ENST00000542786 RREB1Q92766 1687 aa17.2■□□□□ 0.34
LDB3-207ENST00000542786 ATP5JP18859 108 aa17.2■□□□□ 0.34
LDB3-207ENST00000542786 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
LDB3-207ENST00000542786 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
LDB3-207ENST00000542786 ANKRD36CQ5JPF3 1778 aa17.19■□□□□ 0.34
LDB3-207ENST00000542786 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
LDB3-207ENST00000542786 GSE1Q14687 1217 aa17.19■□□□□ 0.34
LDB3-207ENST00000542786 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
LDB3-207ENST00000542786 KCNB2Q92953 911 aa17.19■□□□□ 0.34
LDB3-207ENST00000542786 PLA2G12BQ9BX93 195 aa17.19■□□□□ 0.34
LDB3-207ENST00000542786 CYP2E1P05181 493 aaPredicted RBP17.18■□□□□ 0.34
LDB3-207ENST00000542786 NEK4P51957 841 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 DIAPH3Q9NSV4 1193 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 PCCAP05165 728 aaPredicted RBP17.18■□□□□ 0.34
LDB3-207ENST00000542786 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 GPR108Q9NPR9 543 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 JCADQ9P266 1359 aa17.18■□□□□ 0.34
LDB3-207ENST00000542786 HSP90AA1P07900 732 aaKnown RBP17.17■□□□□ 0.34
LDB3-207ENST00000542786 CUL4AQ13619 759 aa17.17■□□□□ 0.34
LDB3-207ENST00000542786 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
LDB3-207ENST00000542786 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
LDB3-207ENST00000542786 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
LDB3-207ENST00000542786 IL27Q8NEV9 243 aa17.17■□□□□ 0.34
LDB3-207ENST00000542786 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
LDB3-207ENST00000542786 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
LDB3-207ENST00000542786 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
LDB3-207ENST00000542786 ZNF609O15014 1411 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 RFX7Q2KHR2 1363 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 CIAO1O76071 339 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 MCM2P49736 904 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 PTH1RQ03431 593 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 TMX3Q96JJ7 454 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 DBNDD2Q9BQY9 259 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 ZBTB1Q9Y2K1 713 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 NMIQ13287 307 aaPredicted RBP17.16■□□□□ 0.34
LDB3-207ENST00000542786 HLFQ16534 295 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
LDB3-207ENST00000542786 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 EYA2O00167 538 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 HIP1O00291 1037 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 CSF1RP07333 972 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 SSFA2P28290 1259 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
LDB3-207ENST00000542786 DDB1Q16531 1140 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
LDB3-207ENST00000542786 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
LDB3-207ENST00000542786 TTC14Q96N46 770 aa17.15■□□□□ 0.34
LDB3-207ENST00000542786 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
LDB3-207ENST00000542786 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
LDB3-207ENST00000542786 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
LDB3-207ENST00000542786 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
LDB3-207ENST00000542786 TOM1O60784 492 aa17.14■□□□□ 0.33
LDB3-207ENST00000542786 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
LDB3-207ENST00000542786 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
LDB3-207ENST00000542786 HAUS7Q99871 368 aa17.14■□□□□ 0.33
LDB3-207ENST00000542786 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
LDB3-207ENST00000542786 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
LDB3-207ENST00000542786 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
LDB3-207ENST00000542786 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
LDB3-207ENST00000542786 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
LDB3-207ENST00000542786 KIAA1211Q6ZU35 1233 aa17.13■□□□□ 0.33
LDB3-207ENST00000542786 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
LDB3-207ENST00000542786 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
LDB3-207ENST00000542786 CHMP3Q9Y3E7 222 aa17.13■□□□□ 0.33
LDB3-207ENST00000542786 ZNF330Q9Y3S2 320 aaPredicted RBP17.13■□□□□ 0.33
LDB3-207ENST00000542786 NUP98P52948 1817 aa17.13■□□□□ 0.33
LDB3-207ENST00000542786 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
LDB3-207ENST00000542786 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
LDB3-207ENST00000542786 INTS5Q6P9B9 1019 aaKnown RBP17.12■□□□□ 0.33
LDB3-207ENST00000542786 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms