RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 UBE3BQ7Z3V4 1068 aa10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 RPAP2Q8IXW5 612 aaPredicted RBP10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 ZBTB38Q8NAP3 1195 aaPredicted RBP10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 JARID2Q92833 1246 aaPredicted RBP10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 RWDD1Q9H446 243 aaPredicted RBP10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 ANO8Q9HCE9 1232 aaPredicted RBP10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
MRPL40P1-201ENST00000542687 LY75O60449 1722 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 GYS1P13807 737 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 HSP90B1P14625 803 aaKnown RBP10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 R3HDM1Q15032 1099 aaKnown RBP10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 SUSD4Q5VX71 490 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 B4GALNT3Q6L9W6 998 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 SUCLG2Q96I99 432 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 NYXQ9GZU5 481 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 NUP188Q5SRE5 1749 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 UBN2Q6ZU65 1347 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
MRPL40P1-201ENST00000542687 NPHP1O15259 732 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 HMMRO75330 724 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 CASP7P55210 303 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 NFIXQ14938 502 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 CEP85Q6P2H3 762 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 TPTE2Q6XPS3 522 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 NBPF5PQ86XG9 351 aaPredicted RBP10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 ANKRD44Q8N8A2 993 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 FAM89AQ96GI7 184 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
MRPL40P1-201ENST00000542687 IRS4O14654 1257 aaPredicted RBP10.02□□□□□ -0.81
MRPL40P1-201ENST00000542687 HDAC1Q13547 482 aaPredicted RBP10.02□□□□□ -0.81
MRPL40P1-201ENST00000542687 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.81
MRPL40P1-201ENST00000542687 RGPD3A6NKT7 1758 aaPredicted RBP10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 RGPD4Q7Z3J3 1758 aa10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 NTSR2O95665 410 aa10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 IGHDP01880 384 aa10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 TM4SF1P30408 202 aa10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 PLA2G12BQ9BX93 195 aa10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 CDHR2Q9BYE9 1310 aa10.01□□□□□ -0.81
MRPL40P1-201ENST00000542687 SRGAP3O43295 1099 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 PDE8AO60658 829 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 SERPINB2P05120 415 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 HCLS1P14317 486 aaPredicted RBP10□□□□□ -0.81
MRPL40P1-201ENST00000542687 FOXO4P98177 505 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 MTX1Q13505 466 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 ERFEQ4G0M1 354 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 EPHA10Q5JZY3 1008 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 LMBR1LQ6UX01 489 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 SIRT2Q8IXJ6 389 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 SYNE4Q8N205 404 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 CNBD1Q8NA66 436 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 KAZALD1Q96I82 304 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 PARP3Q9Y6F1 533 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 CARMIL3Q8ND23 1372 aa10□□□□□ -0.81
MRPL40P1-201ENST00000542687 CACNA1FO60840 1977 aa9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 MYH14Q7Z406 1995 aaKnown RBP9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 MMP10P09238 476 aa9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 SLC10A5Q5PT55 438 aa9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 MSL1Q68DK7 614 aa9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 CENPQQ7L2Z9 268 aaPredicted RBP9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 SSH3Q8TE77 659 aa9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
MRPL40P1-201ENST00000542687 PNMA6EA0A0J9YXQ4 647 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 POLRMTO00411 1230 aaKnown RBP9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 CSF1RP07333 972 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 CTSWP56202 376 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 ST5P78524 1137 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 DDR1Q08345 913 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 POLA2Q14181 598 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 GCC1Q96CN9 775 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 NLRP3Q96P20 1036 aa9.98□□□□□ -0.81
MRPL40P1-201ENST00000542687 SURF6O75683 361 aaKnown RBP9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 IFIT5Q13325 482 aaKnown RBP9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 CCDC57Q2TAC2 916 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 TAF7LQ5H9L4 462 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 CCDC24Q8N4L8 307 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 TTLL11Q8NHH1 800 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 PDGFDQ9GZP0 370 aaPredicted RBP9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
MRPL40P1-201ENST00000542687 TAF1LQ8IZX4 1826 aa9.96□□□□□ -0.81
MRPL40P1-201ENST00000542687 ANKRD18BA2A2Z9 1011 aa9.96□□□□□ -0.82
MRPL40P1-201ENST00000542687 G3BP1Q13283 466 aaKnown RBP eCLIP9.96□□□□□ -0.82
MRPL40P1-201ENST00000542687 SF3B3Q15393 1217 aaKnown RBP9.96□□□□□ -0.82
MRPL40P1-201ENST00000542687 PRR5LQ6MZQ0 368 aa9.96□□□□□ -0.82
MRPL40P1-201ENST00000542687 SMC5Q8IY18 1101 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms