RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
C2CD3-217ENST00000542452 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 PARP10Q53GL7 1025 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 MASTLQ96GX5 879 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 ISCA1Q9BUE6 129 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 NYXQ9GZU5 481 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 SNED1Q8TER0 1413 aa14.89□□□□□ -0.03
C2CD3-217ENST00000542452 NFKBIEO00221 500 aa14.88□□□□□ -0.03
C2CD3-217ENST00000542452 CRY2Q49AN0 593 aa14.88□□□□□ -0.03
C2CD3-217ENST00000542452 HSP90AB3PQ58FF7 597 aa14.88□□□□□ -0.03
C2CD3-217ENST00000542452 PRPF40BQ6NWY9 871 aaKnown RBP14.88□□□□□ -0.03
C2CD3-217ENST00000542452 ANKRD13DQ6ZTN6 518 aa14.88□□□□□ -0.03
C2CD3-217ENST00000542452 G2E3Q7L622 706 aa14.88□□□□□ -0.03
C2CD3-217ENST00000542452 SYNE4Q8N205 404 aa14.88□□□□□ -0.03
C2CD3-217ENST00000542452 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
C2CD3-217ENST00000542452 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
C2CD3-217ENST00000542452 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
C2CD3-217ENST00000542452 MIER1Q8N108 512 aa14.87□□□□□ -0.03
C2CD3-217ENST00000542452 UTP14AQ9BVJ6 771 aaKnown RBP14.87□□□□□ -0.03
C2CD3-217ENST00000542452 ATP5J2-PTCD1G3V325 749 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 C21orf2O43822 256 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 VAMP4O75379 141 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 NPR1P16066 1061 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 GTF2E1P29083 439 aaPredicted RBP14.86□□□□□ -0.03
C2CD3-217ENST00000542452 OLFM4Q6UX06 510 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 PPP1R42Q7Z4L9 355 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 C7orf43Q8WVR3 580 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
C2CD3-217ENST00000542452 GOLGA2Q08379 1002 aa14.85□□□□□ -0.03
C2CD3-217ENST00000542452 C9orf131Q5VYM1 1079 aa14.85□□□□□ -0.03
C2CD3-217ENST00000542452 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
C2CD3-217ENST00000542452 RNF123Q5XPI4 1314 aa14.85□□□□□ -0.03
C2CD3-217ENST00000542452 SLC10A5Q5PT55 438 aa14.84□□□□□ -0.03
C2CD3-217ENST00000542452 MYD88Q99836 296 aa14.84□□□□□ -0.03
C2CD3-217ENST00000542452 HCLS1P14317 486 aaPredicted RBP14.83□□□□□ -0.04
C2CD3-217ENST00000542452 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
C2CD3-217ENST00000542452 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
C2CD3-217ENST00000542452 RNF181Q9P0P0 153 aa14.83□□□□□ -0.04
C2CD3-217ENST00000542452 TRMT112Q9UI30 125 aaKnown RBP14.83□□□□□ -0.04
C2CD3-217ENST00000542452 COL4A5P29400 1685 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
C2CD3-217ENST00000542452 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
C2CD3-217ENST00000542452 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
C2CD3-217ENST00000542452 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 MAP3K2Q9Y2U5 619 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 ABCC4O15439 1325 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 SH3TC1Q8TE82 1336 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 MYH3P11055 1940 aa14.82□□□□□ -0.04
C2CD3-217ENST00000542452 PI4KAP2A4QPH2 592 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 IGKV5-2P06315 115 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 FLIIQ13045 1269 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 TRIM28Q13263 835 aaKnown RBP14.81□□□□□ -0.04
C2CD3-217ENST00000542452 PI4KAP1Q8N8J0 262 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 FAM89AQ96GI7 184 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 CDCA7LQ96GN5 454 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 LTBP3Q9NS15 1303 aa14.81□□□□□ -0.04
C2CD3-217ENST00000542452 SLFN5Q08AF3 891 aa14.8□□□□□ -0.04
C2CD3-217ENST00000542452 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
C2CD3-217ENST00000542452 KSR2Q6VAB6 950 aa14.8□□□□□ -0.04
C2CD3-217ENST00000542452 DUOX1Q9NRD9 1551 aa14.8□□□□□ -0.04
C2CD3-217ENST00000542452 LTBP1Q14766 1721 aa14.8□□□□□ -0.04
C2CD3-217ENST00000542452 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
C2CD3-217ENST00000542452 LMNB1P20700 586 aa14.79□□□□□ -0.04
C2CD3-217ENST00000542452 CCDC93Q567U6 631 aa14.79□□□□□ -0.04
C2CD3-217ENST00000542452 JARID2Q92833 1246 aaPredicted RBP14.79□□□□□ -0.04
C2CD3-217ENST00000542452 RPGRQ92834 1020 aaKnown RBP14.79□□□□□ -0.04
C2CD3-217ENST00000542452 NLRP3Q96P20 1036 aa14.79□□□□□ -0.04
C2CD3-217ENST00000542452 CRAMP1Q96RY5 1269 aa14.79□□□□□ -0.04
C2CD3-217ENST00000542452 TAOK3Q9H2K8 898 aa14.79□□□□□ -0.04
C2CD3-217ENST00000542452 E9PSI1 815 aa14.78□□□□□ -0.04
C2CD3-217ENST00000542452 DDX58O95786 925 aaKnown RBP14.78□□□□□ -0.04
C2CD3-217ENST00000542452 ALDH1B1P30837 517 aa14.78□□□□□ -0.04
C2CD3-217ENST00000542452 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
C2CD3-217ENST00000542452 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
C2CD3-217ENST00000542452 CHMP4AQ9BY43 222 aa14.78□□□□□ -0.04
C2CD3-217ENST00000542452 IRS4O14654 1257 aaPredicted RBP14.77□□□□□ -0.05
C2CD3-217ENST00000542452 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.05
C2CD3-217ENST00000542452 PCCAP05165 728 aaPredicted RBP14.77□□□□□ -0.05
C2CD3-217ENST00000542452 SOGA3Q5TF21 947 aa14.77□□□□□ -0.05
C2CD3-217ENST00000542452 TRMT2AQ8IZ69 625 aaKnown RBP14.77□□□□□ -0.05
C2CD3-217ENST00000542452 CCDC191Q8NCU4 936 aa14.77□□□□□ -0.05
C2CD3-217ENST00000542452 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.05
C2CD3-217ENST00000542452 CWC25Q9NXE8 425 aaPredicted RBP14.77□□□□□ -0.05
C2CD3-217ENST00000542452 WDR90Q96KV7 1748 aa14.77□□□□□ -0.05
C2CD3-217ENST00000542452 NEURL1BA8MQ27 555 aa14.76□□□□□ -0.05
C2CD3-217ENST00000542452 KIF3CO14782 793 aa14.76□□□□□ -0.05
C2CD3-217ENST00000542452 FKBP4Q02790 459 aaKnown RBP eCLIP14.76□□□□□ -0.05
C2CD3-217ENST00000542452 FKBP5Q13451 457 aaPredicted RBP14.76□□□□□ -0.05
C2CD3-217ENST00000542452 ZBTB38Q8NAP3 1195 aaPredicted RBP14.76□□□□□ -0.05
C2CD3-217ENST00000542452 NMRK2Q9NPI5 230 aa14.76□□□□□ -0.05
C2CD3-217ENST00000542452 CDHR2Q9BYE9 1310 aa14.75□□□□□ -0.05
C2CD3-217ENST00000542452 ZC3H4Q9UPT8 1303 aaKnown RBP14.75□□□□□ -0.05
C2CD3-217ENST00000542452 F6X3S4 739 aa14.75□□□□□ -0.05
C2CD3-217ENST00000542452 SF3B3Q15393 1217 aaKnown RBP14.75□□□□□ -0.05
C2CD3-217ENST00000542452 DNAAF4Q8WXU2 420 aa14.75□□□□□ -0.05
C2CD3-217ENST00000542452 ZNF277Q9NRM2 450 aaPredicted RBP14.75□□□□□ -0.05
C2CD3-217ENST00000542452 GRAPQ13588 217 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms