RNA–Protein interactions for RNA: ENST00000542447.6

CADM1-212, Transcript of cell adhesion molecule 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CADM1, Length 4,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-212ENST00000542447 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
CADM1-212ENST00000542447 ZNF396Q96N95 335 aaPredicted RBP13.47□□□□□ -0.25
CADM1-212ENST00000542447 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
CADM1-212ENST00000542447 TOP1P11387 765 aaKnown RBP13.46□□□□□ -0.25
CADM1-212ENST00000542447 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
CADM1-212ENST00000542447 TXLNBQ8N3L3 684 aa13.46□□□□□ -0.25
CADM1-212ENST00000542447 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
CADM1-212ENST00000542447 KIF2AO00139 706 aaPredicted RBP13.46□□□□□ -0.25
CADM1-212ENST00000542447 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.25
CADM1-212ENST00000542447 CUL4AQ13619 759 aa13.46□□□□□ -0.25
CADM1-212ENST00000542447 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.25
CADM1-212ENST00000542447 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
CADM1-212ENST00000542447 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
CADM1-212ENST00000542447 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.25
CADM1-212ENST00000542447 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
CADM1-212ENST00000542447 PTH1RQ03431 593 aa13.46□□□□□ -0.26
CADM1-212ENST00000542447 ANKRD1Q15327 319 aa13.46□□□□□ -0.26
CADM1-212ENST00000542447 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.26
CADM1-212ENST00000542447 LEO1Q8WVC0 666 aaPredicted RBP13.46□□□□□ -0.26
CADM1-212ENST00000542447 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
CADM1-212ENST00000542447 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 NEMFO60524 1076 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 ZSCAN26Q16670 478 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 HSP90AB3PQ58FF7 597 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 FAM227BQ96M60 508 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
CADM1-212ENST00000542447 HSPA4P34932 840 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 JAKMIP3Q5VZ66 844 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 MORC2Q9Y6X9 1032 aaPredicted RBP13.45□□□□□ -0.26
CADM1-212ENST00000542447 SYNMO15061 1565 aa13.45□□□□□ -0.26
CADM1-212ENST00000542447 RHOXF2BP0C7M4 288 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 ATP8B2P98198 1209 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 RHOXF2Q9BQY4 288 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 PLEKHA4Q9H4M7 779 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 PTPRCP08575 1304 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
CADM1-212ENST00000542447 MARCKSP29966 332 aaPredicted RBP13.44□□□□□ -0.26
CADM1-212ENST00000542447 GSDMDP57764 484 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 RASSF8Q8NHQ8 419 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 LZTFL1Q9NQ48 299 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 PI4KAP2A4QPH2 592 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 SGSM2O43147 1006 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
CADM1-212ENST00000542447 PI4KAP1Q8N8J0 262 aa13.44□□□□□ -0.26
CADM1-212ENST00000542447 CAGE1Q8TC20 777 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 PHAXQ9H814 394 aaKnown RBP13.43□□□□□ -0.26
CADM1-212ENST00000542447 IDI1Q13907 227 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 UBASH3AP57075 661 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 CLSTN2Q9H4D0 955 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 ECHDC1Q9NTX5 307 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 TPCN1Q9ULQ1 816 aa13.43□□□□□ -0.26
CADM1-212ENST00000542447 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 CLCN6P51797 869 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 MNAT1P51948 309 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
CADM1-212ENST00000542447 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 GDAP1L1Q96MZ0 367 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
CADM1-212ENST00000542447 TRPM1Q7Z4N2 1603 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 RAD51AP2Q09MP3 1159 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 MICALL1Q8N3F8 863 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 IL25Q9H293 177 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 NCOA5Q9HCD5 579 aaKnown RBP13.42□□□□□ -0.26
CADM1-212ENST00000542447 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 ABCA8O94911 1581 aa13.42□□□□□ -0.26
CADM1-212ENST00000542447 TRIM66O15016 1216 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 CCP110O43303 1012 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 TPM1P09493 284 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 SMC1AQ14683 1233 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 E2F4Q16254 413 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 Q6ZUG5 572 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 EDC3Q96F86 508 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 MYL6BP14649 208 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 NLRP6P59044 892 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 HAND2P61296 217 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 DNAJC21Q5F1R6 531 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 FKBP15Q5T1M5 1219 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 HINFPQ9BQA5 517 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
CADM1-212ENST00000542447 ZNF518AQ6AHZ1 1483 aa13.41□□□□□ -0.26
CADM1-212ENST00000542447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.4□□□□□ -0.26
CADM1-212ENST00000542447 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.26
CADM1-212ENST00000542447 ERLIN1O75477 346 aa13.4□□□□□ -0.26
CADM1-212ENST00000542447 DHX8Q14562 1220 aaKnown RBP13.4□□□□□ -0.26
CADM1-212ENST00000542447 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
CADM1-212ENST00000542447 TRIM29Q14134 588 aa13.4□□□□□ -0.26
CADM1-212ENST00000542447 CCDC129Q6ZRS4 1044 aa13.4□□□□□ -0.26
CADM1-212ENST00000542447 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms