RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 ZPR1O75312 459 aa11.8□□□□□ -0.52
NPIPB4-216ENST00000542338 SSFA2P28290 1259 aa11.8□□□□□ -0.52
NPIPB4-216ENST00000542338 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
NPIPB4-216ENST00000542338 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
NPIPB4-216ENST00000542338 MYD88Q99836 296 aa11.8□□□□□ -0.52
NPIPB4-216ENST00000542338 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
NPIPB4-216ENST00000542338 COL15A1P39059 1388 aa11.79□□□□□ -0.52
NPIPB4-216ENST00000542338 GNAI2P04899 355 aa11.79□□□□□ -0.52
NPIPB4-216ENST00000542338 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
NPIPB4-216ENST00000542338 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
NPIPB4-216ENST00000542338 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
NPIPB4-216ENST00000542338 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 COL5A3P25940 1745 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 NEURL1BA8MQ27 555 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 HSP90B1P14625 803 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 RFC4P35249 363 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 GCKRQ14397 625 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 GPR162Q16538 588 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 COL23A1Q86Y22 540 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 ISCA1Q9BUE6 129 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
NPIPB4-216ENST00000542338 GRM8O00222 908 aa11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 CAMTA2O94983 1202 aa11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 PARP10Q53GL7 1025 aa11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 UTYO14607 1347 aa11.77□□□□□ -0.53
NPIPB4-216ENST00000542338 HMMRO75330 724 aa11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 PHF14O94880 888 aa11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 ZNF34Q8IZ26 560 aa11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 MEIS3Q99687 375 aa11.76□□□□□ -0.53
NPIPB4-216ENST00000542338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
NPIPB4-216ENST00000542338 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
NPIPB4-216ENST00000542338 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-216ENST00000542338 HLFQ16534 295 aa11.75□□□□□ -0.53
NPIPB4-216ENST00000542338 H7C1W4 665 aa11.74□□□□□ -0.53
NPIPB4-216ENST00000542338 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
NPIPB4-216ENST00000542338 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
NPIPB4-216ENST00000542338 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
NPIPB4-216ENST00000542338 ZBTB38Q8NAP3 1195 aaPredicted RBP11.74□□□□□ -0.53
NPIPB4-216ENST00000542338 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 MSL1Q68DK7 614 aa11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 NYXQ9GZU5 481 aa11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
NPIPB4-216ENST00000542338 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 NLGN1Q8N2Q7 840 aa11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 NIP7Q9Y221 180 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 LRRFIP2Q9Y608 721 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
NPIPB4-216ENST00000542338 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.53
NPIPB4-216ENST00000542338 MTX1Q13505 466 aa11.71□□□□□ -0.53
NPIPB4-216ENST00000542338 CEP85Q6P2H3 762 aa11.71□□□□□ -0.53
NPIPB4-216ENST00000542338 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
NPIPB4-216ENST00000542338 GCC1Q96CN9 775 aa11.71□□□□□ -0.53
NPIPB4-216ENST00000542338 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-216ENST00000542338 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 UTRNP46939 3433 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 GPTP24298 496 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 GTF2E1P29083 439 aaPredicted RBP11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 DSG3P32926 999 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
NPIPB4-216ENST00000542338 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 CASP7P55210 303 aa11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 SUSD4Q5VX71 490 aa11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 SSH3Q8TE77 659 aa11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 SUCLG2Q96I99 432 aa11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 SRP68Q9UHB9 627 aaKnown RBP11.69□□□□□ -0.54
NPIPB4-216ENST00000542338 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 PDE8AO60658 829 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 IGHDP01880 384 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 GYS1P13807 737 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 TBC1D9BQ66K14 1250 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 NBPF5PQ86XG9 351 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms