RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 MMRN1Q13201 1228 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 DDX10Q13206 875 aaKnown RBP5.28□□□□□ -1.56
SNHG1-219ENST00000542112 ESCO1Q5FWF5 840 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 PPP1R26Q5T8A7 1209 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-219ENST00000542112 SPRYD7Q5W111 196 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 ICE2Q659A1 982 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 TSHZ1Q6ZSZ6 1077 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 TAS1R3Q7RTX0 852 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 ZNF784Q8NCA9 323 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-219ENST00000542112 CYLDQ9NQC7 956 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 TMPRSS4Q9NRS4 437 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 ZNF358Q9NW07 568 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 TMEM229AB2RXF0 380 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 EIF4G3O43432 1585 aaKnown RBP5.27□□□□□ -1.57
SNHG1-219ENST00000542112 PTCD1O75127 700 aaKnown RBP5.27□□□□□ -1.57
SNHG1-219ENST00000542112 HSP90AB1P08238 724 aaKnown RBP5.27□□□□□ -1.57
SNHG1-219ENST00000542112 GUCY2CP25092 1073 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 WEE1P30291 646 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 GDF10P55107 478 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 ADAMTS12P58397 1594 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 MTA1Q13330 715 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 CCDC91Q7Z6B0 441 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 ZNF598Q86UK7 904 aaKnown RBP5.27□□□□□ -1.57
SNHG1-219ENST00000542112 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.27□□□□□ -1.572e-85■□□□□ 9.7
SNHG1-219ENST00000542112 TSEN2Q8NCE0 465 aaKnown RBP5.27□□□□□ -1.57
SNHG1-219ENST00000542112 GAS2L2Q8NHY3 880 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 KIAA1107Q9UPP5 1409 aa5.27□□□□□ -1.57
SNHG1-219ENST00000542112 R3HCC1Q9Y3T6 440 aaKnown RBP5.27□□□□□ -1.57
SNHG1-219ENST00000542112 GAPVD1Q14C86 1478 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 ERBB4Q15303 1308 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 CCDC196A0A1B0GTZ2 297 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 SOWAHDA6NJG2 315 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 CTAGE5O15320 804 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 LILRA1O75019 489 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 INHAP05111 366 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 IGFBP4P22692 258 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 MCM4P33991 863 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 SCNN1DP51172 638 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 ZNF697Q5TEC3 545 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 COL26A1Q96A83 441 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 SLC4A9Q96Q91 983 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 EGFL7Q9UHF1 273 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 WASF2Q9Y6W5 498 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 V9GY48 417 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-219ENST00000542112 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-219ENST00000542112 IFT140Q96RY7 1462 aa5.26□□□□□ -1.57
SNHG1-219ENST00000542112 A0A0G2JS52 829 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 KLHL33A6NCF5 533 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 E9PSI1 815 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 FOXO3O43524 673 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 ALDH1A1P00352 501 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 NR3C2P08235 984 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 TDO2P48775 406 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 NGEFQ8N5V2 710 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 SNIP1Q8TAD8 396 aaKnown RBP5.25□□□□□ -1.57
SNHG1-219ENST00000542112 TMC1Q8TDI8 760 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 RASSF4Q9H2L5 321 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 NUB1Q9Y5A7 615 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 PAXBP1Q9Y5B6 917 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 CARMIL1Q5VZK9 1371 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 LRRIQ1Q96JM4 1722 aa5.25□□□□□ -1.57
SNHG1-219ENST00000542112 EIF3JO75822 258 aaKnown RBP5.24□□□□□ -1.57
SNHG1-219ENST00000542112 NOP2P46087 812 aaKnown RBP5.24□□□□□ -1.57
SNHG1-219ENST00000542112 SERPINB4P48594 390 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 NNTQ13423 1086 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 NOM1Q5C9Z4 860 aaKnown RBP5.24□□□□□ -1.57
SNHG1-219ENST00000542112 MUM1L1Q5H9M0 696 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 JMYQ8N9B5 988 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 TSPAN18Q96SJ8 248 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 ETNK1Q9HBU6 452 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 PLA2G2EQ9NZK7 142 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 CCDC39Q9UFE4 941 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 ZKSCAN5Q9Y2L8 839 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 KTN1Q86UP2 1357 aaKnown RBP5.24□□□□□ -1.57
SNHG1-219ENST00000542112 TDRD9Q8NDG6 1382 aaKnown RBP5.24□□□□□ -1.57
SNHG1-219ENST00000542112 UHRF1BP1LA0JNW5 1464 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 ARAP1Q96P48 1450 aa5.24□□□□□ -1.57
SNHG1-219ENST00000542112 LOC102724159A0A0B4J2E5 919 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 IPO7O95373 1038 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ADH1AP07327 375 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ERCC3P19447 782 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 ADD1P35611 737 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 EPHA4P54764 986 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 GSCP56915 257 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 SARNPP82979 210 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 FOXC1Q12948 553 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 PDE3BQ13370 1112 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 PWP2Q15269 919 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 RABEP1Q15276 862 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 CCDC96Q2M329 555 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 C11orf91Q3C1V1 193 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 RINLQ6ZS11 566 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 EXOC8Q8IYI6 725 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 TNS4Q8IZW8 715 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 STAG2Q8N3U4 1231 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 MSL3Q8N5Y2 521 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 TBC1D22AQ8WUA7 517 aa5.23□□□□□ -1.57
SNHG1-219ENST00000542112 SCG3Q8WXD2 468 aaKnown RBP5.23□□□□□ -1.57
SNHG1-219ENST00000542112 XAGE2Q96GT9 111 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms