RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 WWC1Q8IX03 1113 aa28.59■■■□□ 2.17
C2CD3-216ENST00000541922 TAOK3Q9H2K8 898 aa28.59■■■□□ 2.17
C2CD3-216ENST00000541922 NMRK2Q9NPI5 230 aa28.59■■■□□ 2.17
C2CD3-216ENST00000541922 C7orf43Q8WVR3 580 aa28.58■■■□□ 2.17
C2CD3-216ENST00000541922 RPGRQ92834 1020 aaKnown RBP28.58■■■□□ 2.17
C2CD3-216ENST00000541922 LTBP3Q9NS15 1303 aa28.58■■■□□ 2.17
C2CD3-216ENST00000541922 TIAM2Q8IVF5 1701 aa28.57■■■□□ 2.16
C2CD3-216ENST00000541922 CCDC93Q567U6 631 aa28.57■■■□□ 2.16
C2CD3-216ENST00000541922 ANKRD13DQ6ZTN6 518 aa28.57■■■□□ 2.16
C2CD3-216ENST00000541922 C8orf58Q8NAV2 365 aa28.57■■■□□ 2.16
C2CD3-216ENST00000541922 PLBD2Q8NHP8 589 aa28.57■■■□□ 2.16
C2CD3-216ENST00000541922 DICER1Q9UPY3 1922 aaKnown RBP28.57■■■□□ 2.16
C2CD3-216ENST00000541922 NCBP3Q53F19 620 aaKnown RBP28.56■■■□□ 2.16
C2CD3-216ENST00000541922 NLRP10Q86W26 655 aa28.56■■■□□ 2.16
C2CD3-216ENST00000541922 RNF123Q5XPI4 1314 aa28.55■■■□□ 2.16
C2CD3-216ENST00000541922 CHMP4AQ9BY43 222 aa28.55■■■□□ 2.16
C2CD3-216ENST00000541922 TSR2Q969E8 191 aaKnown RBP28.54■■■□□ 2.16
C2CD3-216ENST00000541922 NLRP3Q96P20 1036 aa28.54■■■□□ 2.16
C2CD3-216ENST00000541922 HOXA10P31260 410 aaPredicted RBP28.53■■■□□ 2.16
C2CD3-216ENST00000541922 SLC10A5Q5PT55 438 aa28.53■■■□□ 2.16
C2CD3-216ENST00000541922 RBM17Q96I25 401 aaKnown RBP28.52■■■□□ 2.16
C2CD3-216ENST00000541922 TRMT112Q9UI30 125 aaKnown RBP28.52■■■□□ 2.16
C2CD3-216ENST00000541922 IL16Q14005 1332 aa28.51■■■□□ 2.15
C2CD3-216ENST00000541922 GLTPD2A6NH11 291 aa28.51■■■□□ 2.15
C2CD3-216ENST00000541922 CCDC30Q5VVM6 783 aa28.51■■■□□ 2.15
C2CD3-216ENST00000541922 RTKN2Q8IZC4 609 aa28.51■■■□□ 2.15
C2CD3-216ENST00000541922 FAM9BQ8IZU0 186 aa28.51■■■□□ 2.15
C2CD3-216ENST00000541922 SALL2Q9Y467 1007 aaPredicted RBP28.51■■■□□ 2.15
C2CD3-216ENST00000541922 TOMM70O94826 608 aa28.5■■■□□ 2.15
C2CD3-216ENST00000541922 OLFM4Q6UX06 510 aa28.5■■■□□ 2.15
C2CD3-216ENST00000541922 C3orf67Q6ZVT6 689 aa28.5■■■□□ 2.15
C2CD3-216ENST00000541922 TSPYL6Q8N831 410 aa28.5■■■□□ 2.15
C2CD3-216ENST00000541922 CRAMP1Q96RY5 1269 aa28.5■■■□□ 2.15
C2CD3-216ENST00000541922 RRAGCQ9HB90 399 aa28.5■■■□□ 2.15
C2CD3-216ENST00000541922 SH3TC1Q8TE82 1336 aa28.49■■■□□ 2.15
C2CD3-216ENST00000541922 FKBP4Q02790 459 aaKnown RBP eCLIP28.49■■■□□ 2.15
C2CD3-216ENST00000541922 GOLGA2Q08379 1002 aa28.49■■■□□ 2.15
C2CD3-216ENST00000541922 C16orf71Q8IYS4 520 aaPredicted RBP28.49■■■□□ 2.15
C2CD3-216ENST00000541922 PHAXQ9H814 394 aaKnown RBP28.49■■■□□ 2.15
C2CD3-216ENST00000541922 DPY19L2Q6NUT2 758 aa28.48■■■□□ 2.15
C2CD3-216ENST00000541922 RIC3Q7Z5B4 369 aa28.48■■■□□ 2.15
C2CD3-216ENST00000541922 ISCA1Q9BUE6 129 aa28.48■■■□□ 2.15
C2CD3-216ENST00000541922 ATP5J2-PTCD1G3V325 749 aa28.47■■■□□ 2.15
C2CD3-216ENST00000541922 HCLS1P14317 486 aaPredicted RBP28.47■■■□□ 2.15
C2CD3-216ENST00000541922 CC2D2BQ6DHV5 1058 aa28.47■■■□□ 2.15
C2CD3-216ENST00000541922 SYNE4Q8N205 404 aa28.47■■■□□ 2.15
C2CD3-216ENST00000541922 LAMB2P55268 1798 aa28.47■■■□□ 2.15
C2CD3-216ENST00000541922 ZNF428Q96B54 188 aa28.46■■■□□ 2.15
C2CD3-216ENST00000541922 WDR63Q8IWG1 891 aa28.45■■■□□ 2.14
C2CD3-216ENST00000541922 PPEF1O14829 653 aaPredicted RBP28.44■■■□□ 2.14
C2CD3-216ENST00000541922 TWISTNBQ3B726 338 aaPredicted RBP28.44■■■□□ 2.14
C2CD3-216ENST00000541922 ZNF277Q9NRM2 450 aaPredicted RBP28.44■■■□□ 2.14
C2CD3-216ENST00000541922 DDX58O95786 925 aaKnown RBP28.43■■■□□ 2.14
C2CD3-216ENST00000541922 TRIM28Q13263 835 aaKnown RBP28.43■■■□□ 2.14
C2CD3-216ENST00000541922 STK31Q9BXU1 1019 aa28.43■■■□□ 2.14
C2CD3-216ENST00000541922 TCERG1O14776 1098 aaKnown RBP28.42■■■□□ 2.14
C2CD3-216ENST00000541922 VEGFAP15692 232 aaPredicted RBP28.42■■■□□ 2.14
C2CD3-216ENST00000541922 HSPA6P17066 643 aa28.42■■■□□ 2.14
C2CD3-216ENST00000541922 GRIPAP1Q4V328 841 aa28.42■■■□□ 2.14
C2CD3-216ENST00000541922 RBM46Q8TBY0 533 aaKnown RBP28.42■■■□□ 2.14
C2CD3-216ENST00000541922 FAM89AQ96GI7 184 aa28.41■■■□□ 2.14
C2CD3-216ENST00000541922 PSMD1Q99460 953 aa28.41■■■□□ 2.14
C2CD3-216ENST00000541922 TMX4Q9H1E5 349 aaPredicted RBP28.41■■■□□ 2.14
C2CD3-216ENST00000541922 ABCC4O15439 1325 aa28.41■■■□□ 2.14
C2CD3-216ENST00000541922 FANCIQ9NVI1 1328 aa28.41■■■□□ 2.14
C2CD3-216ENST00000541922 MYD88Q99836 296 aa28.4■■■□□ 2.14
C2CD3-216ENST00000541922 SNED1Q8TER0 1413 aa28.4■■■□□ 2.14
C2CD3-216ENST00000541922 DDX60Q8IY21 1712 aaKnown RBP28.4■■■□□ 2.14
C2CD3-216ENST00000541922 IARSP41252 1262 aaKnown RBP28.39■■■□□ 2.14
C2CD3-216ENST00000541922 DDX46Q7L014 1031 aaKnown RBP28.39■■■□□ 2.14
C2CD3-216ENST00000541922 WDR90Q96KV7 1748 aa28.39■■■□□ 2.14
C2CD3-216ENST00000541922 RTL5Q5HYW3 569 aaPredicted RBP28.38■■■□□ 2.13
C2CD3-216ENST00000541922 BBOX1O75936 387 aa28.37■■■□□ 2.13
C2CD3-216ENST00000541922 ATP6V0A2Q9Y487 856 aa28.37■■■□□ 2.13
C2CD3-216ENST00000541922 DDNO94850 711 aaPredicted RBP28.36■■■□□ 2.13
C2CD3-216ENST00000541922 METTL22Q9BUU2 404 aaPredicted RBP28.36■■■□□ 2.13
C2CD3-216ENST00000541922 CCDC191Q8NCU4 936 aa28.35■■■□□ 2.13
C2CD3-216ENST00000541922 MAP3K2Q9Y2U5 619 aa28.35■■■□□ 2.13
C2CD3-216ENST00000541922 TAF1P21675 1872 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 IRS4O14654 1257 aaPredicted RBP28.34■■■□□ 2.13
C2CD3-216ENST00000541922 SLC4A2P04920 1241 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 FSTL1Q12841 308 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 GRAPQ13588 217 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 KSR2Q6VAB6 950 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 SLC51AQ86UW1 340 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 ZBTB38Q8NAP3 1195 aaPredicted RBP28.34■■■□□ 2.13
C2CD3-216ENST00000541922 GRAPLQ8TC17 118 aaPredicted RBP28.34■■■□□ 2.13
C2CD3-216ENST00000541922 JDP2Q8WYK2 163 aa28.34■■■□□ 2.13
C2CD3-216ENST00000541922 CACNA1FO60840 1977 aa28.33■■■□□ 2.13
C2CD3-216ENST00000541922 PI4KAP2A4QPH2 592 aa28.33■■■□□ 2.13
C2CD3-216ENST00000541922 POTECB2RU33 542 aa28.33■■■□□ 2.13
C2CD3-216ENST00000541922 EXOSC9Q06265 439 aaKnown RBP28.33■■■□□ 2.13
C2CD3-216ENST00000541922 SF3B3Q15393 1217 aaKnown RBP28.33■■■□□ 2.13
C2CD3-216ENST00000541922 SP8Q8IXZ3 490 aa28.33■■■□□ 2.13
C2CD3-216ENST00000541922 PI4KAP1Q8N8J0 262 aa28.33■■■□□ 2.13
C2CD3-216ENST00000541922 CWC25Q9NXE8 425 aaPredicted RBP28.33■■■□□ 2.13
C2CD3-216ENST00000541922 HSP90B1P14625 803 aaKnown RBP28.32■■■□□ 2.12
C2CD3-216ENST00000541922 SMC1BQ8NDV3 1235 aa28.32■■■□□ 2.12
C2CD3-216ENST00000541922 MYH16Q9H6N6 1097 aa28.32■■■□□ 2.12
C2CD3-216ENST00000541922 G2E3Q7L622 706 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms