RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
GABRB3-204ENST00000541819 CCT2P78371 535 aaKnown RBP12.3□□□□□ -0.44
GABRB3-204ENST00000541819 NCBP1Q09161 790 aaKnown RBP12.3□□□□□ -0.44
GABRB3-204ENST00000541819 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-204ENST00000541819 KIF4AO95239 1232 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 PRPHP41219 470 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 MCM10Q7L590 875 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-204ENST00000541819 RAD54L2Q9Y4B4 1467 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 EXOC5O00471 708 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 NGLY1Q96IV0 654 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 LIMCH1Q9UPQ0 1083 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
GABRB3-204ENST00000541819 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 BACH2Q9BYV9 841 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
GABRB3-204ENST00000541819 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
GABRB3-204ENST00000541819 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 NBPF1Q3BBV0 1214 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 IMPG2Q9BZV3 1241 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 KIF21BO75037 1637 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 B4DLN1 442 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
GABRB3-204ENST00000541819 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
GABRB3-204ENST00000541819 RFC4P35249 363 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 TRMT1Q9NXH9 659 aaKnown RBP12.28□□□□□ -0.44
GABRB3-204ENST00000541819 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 MAP7D1Q3KQU3 841 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 SELENOOQ9BVL4 669 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 LRPPRCP42704 1394 aaKnown RBP12.28□□□□□ -0.44
GABRB3-204ENST00000541819 GPTP24298 496 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 CCDC117Q8IWD4 279 aaPredicted RBP12.28□□□□□ -0.44
GABRB3-204ENST00000541819 CCDC77Q9BR77 488 aa12.28□□□□□ -0.44
GABRB3-204ENST00000541819 SH3BP5O60239 455 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 PSMC4P43686 418 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 TAF12Q16514 161 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 NCOA7Q8NI08 942 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 SLC26A6Q9BXS9 759 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.27□□□□□ -0.44
GABRB3-204ENST00000541819 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 DAPK1P53355 1430 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 ALDH1L2Q3SY69 923 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.44
GABRB3-204ENST00000541819 CCDC63Q8NA47 563 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 STMN4Q9H169 189 aaPredicted RBP12.27□□□□□ -0.44
GABRB3-204ENST00000541819 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.44
GABRB3-204ENST00000541819 SNX16P57768 344 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 KIAA1524Q8TCG1 905 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 PAIP2Q9BPZ3 127 aaKnown RBP12.27□□□□□ -0.45
GABRB3-204ENST00000541819 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.45
GABRB3-204ENST00000541819 TSPY3P0CV98 308 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 TSPY8P0CW00 308 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 GRM1Q13255 1194 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC6Q16204 474 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 PKNOX2Q96KN3 472 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 BIN1O00499 593 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 ATP2A1O14983 1001 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-204ENST00000541819 SPAG5Q96R06 1193 aa12.27□□□□□ -0.45
GABRB3-204ENST00000541819 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-204ENST00000541819 KIAA1107Q9UPP5 1409 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 SNW1Q13573 536 aaKnown RBP12.26□□□□□ -0.45
GABRB3-204ENST00000541819 USHBP1Q8N6Y0 703 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 AKR1B10O60218 316 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 UQCRFS1P1P0C7P4 283 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 TPD52P55327 224 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-204ENST00000541819 GSTA5Q7RTV2 222 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 SMC6Q96SB8 1091 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 DBF4Q9UBU7 674 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 ZGPATQ8N5A5 531 aaKnown RBP12.26□□□□□ -0.45
GABRB3-204ENST00000541819 MSANTD4Q8NCY6 345 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 AKNAQ7Z591 1439 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 GJB2P29033 226 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 CBX1P83916 185 aa12.26□□□□□ -0.45
GABRB3-204ENST00000541819 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-204ENST00000541819 BMP15O95972 392 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-204ENST00000541819 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 CTAGE1Q96RT6 745 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 CASKIN1Q8WXD9 1431 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 HSPA4P34932 840 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 RRAGBQ5VZM2 374 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 N4BP3O15049 544 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 NOL3O60936 208 aaKnown RBP12.25□□□□□ -0.45
GABRB3-204ENST00000541819 STAT6P42226 847 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms