RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 PDE4BQ07343 736 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 CETN1Q12798 172 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 AQRO60306 1485 aaKnown RBP eCLIP7.27□□□□□ -1.24
DMD-228ENST00000541735 NASPP49321 788 aaPredicted RBP7.27□□□□□ -1.25
DMD-228ENST00000541735 RBM10P98175 930 aaKnown RBP7.27□□□□□ -1.25
DMD-228ENST00000541735 SLC39A6Q13433 755 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 BIN1O00499 593 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 CYP7A1P22680 504 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 ANKRD1Q15327 319 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
DMD-228ENST00000541735 ARHGAP29Q52LW3 1261 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 HSP90AA4PQ58FG1 418 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 TMEM67Q5HYA8 995 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 NLRP3Q96P20 1036 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 STK24Q9Y6E0 443 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 MYCLP12524 364 aaPredicted RBP7.27□□□□□ -1.25
DMD-228ENST00000541735 FBXO31Q5XUX0 539 aaPredicted RBP7.27□□□□□ -1.25
DMD-228ENST00000541735 VPS36Q86VN1 386 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 PPM1EQ8WY54 764 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 TIGD1Q96MW7 591 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 UPF3BQ9BZI7 483 aaKnown RBP7.27□□□□□ -1.25
DMD-228ENST00000541735 CHMP2AO43633 222 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 LDHCP07864 332 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 TCP10Q12799 353 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 TICAM2Q86XR7 235 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 LARGE2Q8N3Y3 721 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 CFAP58Q5T655 872 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 TXLNBQ8N3L3 684 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 PDZRN3Q9UPQ7 1066 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 MAP3K2Q9Y2U5 619 aa7.27□□□□□ -1.25
DMD-228ENST00000541735 GNL1P36915 607 aaPredicted RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 TSTA3Q13630 321 aaPredicted RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 HLTFQ14527 1009 aaKnown RBP eCLIP7.26□□□□□ -1.25
DMD-228ENST00000541735 NOP56O00567 594 aaKnown RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 SNX16P57768 344 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 GEN1Q17RS7 908 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 Q3C1V9 767 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 CCDC152Q4G0S7 254 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 UBE3BQ7Z3V4 1068 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 SPATA17Q96L03 361 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 SLC26A6Q9BXS9 759 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 PTPDC1A2A3K4 754 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 SPDYE16A6NNV3 312 aaPredicted RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 SPDYE2Q495Y8 402 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 NME9Q86XW9 330 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 LRRC45Q96CN5 670 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 IKBKGQ9Y6K9 419 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 NBPF1Q3BBV0 1214 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 SPECC1Q5M775 1068 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 CCDC65Q8IXS2 484 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 PLIN2Q99541 437 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 U3KPZ7 1027 aaPredicted RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 KRT85P78386 507 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 CPXCR1Q8N123 301 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 MIGA1Q8NAN2 632 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 RSPH6AQ9H0K4 717 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 MSH6P52701 1360 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 EIF3JO75822 258 aaKnown RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 CCDC50Q8IVM0 306 aa7.26□□□□□ -1.25
DMD-228ENST00000541735 CRNKL1Q9BZJ0 848 aaKnown RBP7.26□□□□□ -1.25
DMD-228ENST00000541735 NCKAP5LQ9HCH0 1330 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 ANKRD24Q8TF21 1146 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 TTC21AQ8NDW8 1320 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 KRT9P35527 623 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 GSTA5Q7RTV2 222 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 C8orf76Q96K31 380 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 CCDC7Q96M83 1385 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 GADL1Q6ZQY3 521 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 TCP11L1Q9NUJ3 509 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 TNNI2P48788 182 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 PPFIA1Q13136 1202 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 ZNF804AQ7Z570 1209 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 ERICH4A6NGS2 130 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 MFSD6Q6ZSS7 791 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 FCHSD1Q86WN1 690 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 ACRBPQ8NEB7 543 aa7.25□□□□□ -1.25
DMD-228ENST00000541735 CWC25Q9NXE8 425 aaPredicted RBP7.25□□□□□ -1.25
DMD-228ENST00000541735 GSE1Q14687 1217 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 BRDTQ58F21 947 aaPredicted RBP7.24□□□□□ -1.25
DMD-228ENST00000541735 TRAPPC3LQ5T215 181 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 TSHZ3Q63HK5 1081 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 SLC4A4Q9Y6R1 1079 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 CCDC88BA6NC98 1476 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 FSD2A1L4K1 749 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 CBFA2T2O43439 604 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 FAM13AO94988 1023 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 FBLN1P23142 703 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 DPY19L2Q6NUT2 758 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 IMPG2Q9BZV3 1241 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 RRBP1Q9P2E9 1410 aaKnown RBP7.24□□□□□ -1.25
DMD-228ENST00000541735 CCDC192P0DO97 292 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 MXRA7P84157 204 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 CCDC148Q8NFR7 591 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 NBPF3Q9H094 633 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 PPME1Q9Y570 386 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 BAG6P46379 1132 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 GSTO1P78417 241 aa7.24□□□□□ -1.25
DMD-228ENST00000541735 CUL4BQ13620 913 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms