RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ZNF483Q8TF39 744 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 EIF3CQ99613 913 aaKnown RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 ARPC5LQ9BPX5 153 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 RBSNQ9H1K0 784 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 ACBD3Q9H3P7 528 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 BLOC1S6Q9UL45 172 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 MTMR7Q9Y216 660 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 THRAP3Q9Y2W1 955 aaKnown RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 ROCK1Q13464 1354 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 RAB3GAP2Q9H2M9 1393 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 PDLIM1O00151 329 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 TRIM66O15016 1216 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 CHUKO15111 745 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 CBFA2T2O43439 604 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 EPB41L2O43491 1005 aaKnown RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 E2F6O75461 281 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 SKILP12757 684 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 PAX3P23760 479 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 COPB2P35606 906 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 FLT3P36888 993 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 PTPN5P54829 565 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 MCCD1P59942 119 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 PSMD2Q13200 908 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 SF3B2Q13435 895 aaKnown RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 DHX8Q14562 1220 aaKnown RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 SLMAPQ14BN4 828 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 NBPF8Q3BBV2 869 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 TSGA10IPQ3SY00 556 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 NAIF1Q69YI7 327 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 RCSD1Q6JBY9 416 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 SEPT14Q6ZU15 432 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 FILIP1Q7Z7B0 1213 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 TADA2BQ86TJ2 420 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 MYOCDQ8IZQ8 938 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 MRPL50Q8N5N7 158 aaKnown RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 CTCFLQ8NI51 663 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 BAG1Q99933 345 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-218ENST00000541615 ADAM33Q9BZ11 813 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 C22orf23Q9BZE7 217 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 TSPY26PQ9H489 355 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 MTUS2Q5JR59 1369 aa6.05□□□□□ -1.44
SNHG1-218ENST00000541615 SOS1Q07889 1333 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 ABCA5Q8WWZ7 1642 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 RBM47A0AV96 593 aaKnown RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 SHTN1A0MZ66 631 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 GOLGA6L9A6NEM1 432 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 GOLGA8CPA6NN73 597 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 U2SURPO15042 1029 aaKnown RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 NEMFO60524 1076 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 ALDH1B1P30837 517 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 INHBEP58166 350 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 TUBB4BP68371 445 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 G3BP1Q13283 466 aaKnown RBP eCLIP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 E2F4Q16254 413 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 TSNAXIP1Q2TAA8 658 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC38Q502W7 563 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 TMCO3Q6UWJ1 677 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 SPATS2Q86XZ4 545 aaKnown RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 IQCF2Q8IXL9 164 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC170Q8IYT3 715 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 MICALL1Q8N3F8 863 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 FAM76AQ8TAV0 307 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 GPT2Q8TD30 523 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 SAAL1Q96ER3 474 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 PLEKHG4BQ96PX9 1271 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 CRBNQ96SW2 442 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 MPHOSPH6Q99547 160 aaKnown RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 UNC45AQ9H3U1 944 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 ZSCAN16Q9H4T2 348 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 ZNF232Q9UNY5 417 aa6.04□□□□□ -1.44
SNHG1-218ENST00000541615 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 BRD4O60885 1362 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 LRPPRCP42704 1394 aaKnown RBP6.04□□□□□ -1.44
SNHG1-218ENST00000541615 NLRP1Q9C000 1473 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 PTPRCP08575 1304 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 RPGRIP1LQ68CZ1 1315 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC171Q6TFL3 1326 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 PTPRGP23470 1445 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 NCOA1Q15788 1441 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 KIF27Q86VH2 1401 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 PPP1R3GB7ZBB8 358 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 ERC2O15083 957 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 ERLIN2O94905 339 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 HARSP12081 509 aaKnown RBP6.03□□□□□ -1.44
SNHG1-218ENST00000541615 CHMLP26374 656 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 TRPC1P48995 793 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 PSMD7P51665 324 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 MAP3K9P80192 1104 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 TBC1D8BQ0IIM8 1120 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 IFT88Q13099 833 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 TBC1D25Q3MII6 688 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 TMCO4Q5TGY1 634 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 BRAPQ7Z569 592 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 CATIPQ7Z7H3 387 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 FAM114A1Q8IWE2 563 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 GBP7Q8N8V2 638 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-218ENST00000541615 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
SNHG1-218ENST00000541615 KCNV2Q8TDN2 545 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms