RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
SFSWAP-210ENST00000541286 MRC1P22897 1456 aa17.42■□□□□ 0.38
SFSWAP-210ENST00000541286 ABCC4O15439 1325 aa17.42■□□□□ 0.38
SFSWAP-210ENST00000541286 PROM2Q8N271 834 aa17.42■□□□□ 0.38
SFSWAP-210ENST00000541286 MAP3K2Q9Y2U5 619 aa17.42■□□□□ 0.38
SFSWAP-210ENST00000541286 APBA3O96018 575 aa17.41■□□□□ 0.38
SFSWAP-210ENST00000541286 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
SFSWAP-210ENST00000541286 OFD1O75665 1012 aa17.41■□□□□ 0.38
SFSWAP-210ENST00000541286 PKP1Q13835 747 aa17.41■□□□□ 0.38
SFSWAP-210ENST00000541286 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 CCDC24Q8N4L8 307 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 GPTP24298 496 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 EN1Q05925 392 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 SDSP20132 328 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 CASC1Q6TDU7 716 aa17.4■□□□□ 0.38
SFSWAP-210ENST00000541286 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
SFSWAP-210ENST00000541286 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-210ENST00000541286 HLFQ16534 295 aa17.39■□□□□ 0.37
SFSWAP-210ENST00000541286 IGSF3O75054 1194 aa17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 CCDC173Q0VFZ6 552 aa17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 DCTPP1Q9H773 170 aa17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 ZGPATQ8N5A5 531 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 ADCY9O60503 1353 aa17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 FAM196AQ6ZSG2 479 aa17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-210ENST00000541286 INTS5Q6P9B9 1019 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 BTAF1O14981 1849 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 BAG4O95429 457 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 MYD88Q99836 296 aa17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 PDGFDQ9GZP0 370 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-210ENST00000541286 DNTTIP2Q5QJE6 756 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 CCDC85AQ96PX6 553 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 RBSNQ9H1K0 784 aa17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 DDIT3P35638 169 aa17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
SFSWAP-210ENST00000541286 GNPATO15228 680 aa17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 RABEP1Q15276 862 aa17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 EZH2Q15910 746 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-210ENST00000541286 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
SFSWAP-210ENST00000541286 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-210ENST00000541286 CBX1P83916 185 aa17.34■□□□□ 0.37
SFSWAP-210ENST00000541286 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
SFSWAP-210ENST00000541286 ST18O60284 1047 aa17.33■□□□□ 0.37
SFSWAP-210ENST00000541286 STARD3NLO95772 234 aa17.33■□□□□ 0.37
SFSWAP-210ENST00000541286 IGKV5-2P06315 115 aa17.33■□□□□ 0.37
SFSWAP-210ENST00000541286 NEK4P51957 841 aa17.33■□□□□ 0.37
SFSWAP-210ENST00000541286 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.37
SFSWAP-210ENST00000541286 ZNF830Q96NB3 372 aaPredicted RBP17.33■□□□□ 0.37
SFSWAP-210ENST00000541286 DNAAF4Q8WXU2 420 aa17.33■□□□□ 0.36
SFSWAP-210ENST00000541286 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
SFSWAP-210ENST00000541286 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
SFSWAP-210ENST00000541286 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.31■□□□□ 0.36
SFSWAP-210ENST00000541286 UBR2Q8IWV8 1755 aa17.31■□□□□ 0.36
SFSWAP-210ENST00000541286 HMMRO75330 724 aa17.31■□□□□ 0.36
SFSWAP-210ENST00000541286 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
SFSWAP-210ENST00000541286 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 C17orf53Q8N3J3 647 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 HYPKQ9NX55 129 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 ZSCAN23Q3MJ62 389 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
SFSWAP-210ENST00000541286 REC8O95072 547 aa17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 KSR2Q6VAB6 950 aa17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 DZIP3Q86Y13 1208 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 PPP1R9BQ96SB3 815 aa17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 HOXB7P09629 217 aa17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 ILDR2Q71H61 639 aa17.29■□□□□ 0.36
SFSWAP-210ENST00000541286 SYCE3A1L190 88 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 DTNBO60941 627 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 MSL1Q68DK7 614 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 ERC2O15083 957 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms