RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 CACTINQ8WUQ7 758 aaKnown RBP17.64■□□□□ 0.42
AC005840.4-201ENST00000541242 LSG1Q9H089 658 aaKnown RBP17.64■□□□□ 0.42
AC005840.4-201ENST00000541242 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.42
AC005840.4-201ENST00000541242 SGSM2O43147 1006 aa17.64■□□□□ 0.41
AC005840.4-201ENST00000541242 CCDC144BQ3MJ40 725 aa17.64■□□□□ 0.41
AC005840.4-201ENST00000541242 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
AC005840.4-201ENST00000541242 ST3GAL1Q11201 340 aa17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 ADCK5Q3MIX3 580 aa17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 ST7Q9NRC1 585 aa17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 HYPKQ9NX55 129 aa17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 MORC2Q9Y6X9 1032 aaPredicted RBP17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 USP27XA6NNY8 438 aa17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
AC005840.4-201ENST00000541242 ERICH4A6NGS2 130 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 KCNJ4P48050 445 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 ZNF75DP51815 510 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 ARID5BQ14865 1188 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 SYCP1Q15431 976 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 KMT5BQ4FZB7 885 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 TAF3Q5VWG9 929 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 RGPD2P0DJD1 1756 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 TERF2Q15554 542 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
AC005840.4-201ENST00000541242 STK31Q9BXU1 1019 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 FLIIQ13045 1269 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 PLA2G4DQ86XP0 818 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
AC005840.4-201ENST00000541242 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 CEP135Q66GS9 1140 aa17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 CLIP2Q9UDT6 1046 aa17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 ZNF215Q9UL58 517 aaPredicted RBP17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 ME3Q16798 604 aa17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 DNAJC25Q9H1X3 360 aa17.6■□□□□ 0.41
AC005840.4-201ENST00000541242 FAM208AQ9UK61 1670 aaKnown RBP17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 NPHP1O15259 732 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 IRX5P78411 483 aaPredicted RBP17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 PTH1RQ03431 593 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 PDRG1Q9NUG6 133 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 PAXBP1Q9Y5B6 917 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 GCP02774 474 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 GNAI3P08754 354 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
AC005840.4-201ENST00000541242 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.41
AC005840.4-201ENST00000541242 LMOD2Q6P5Q4 547 aa17.58■□□□□ 0.41
AC005840.4-201ENST00000541242 KRT222Q8N1A0 295 aa17.58■□□□□ 0.41
AC005840.4-201ENST00000541242 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
AC005840.4-201ENST00000541242 KRT85P78386 507 aa17.58■□□□□ 0.4
AC005840.4-201ENST00000541242 CEMIPQ8WUJ3 1361 aa17.57■□□□□ 0.4
AC005840.4-201ENST00000541242 ELF2Q15723 593 aa17.57■□□□□ 0.4
AC005840.4-201ENST00000541242 FBXO38Q6PIJ6 1188 aa17.57■□□□□ 0.4
AC005840.4-201ENST00000541242 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
AC005840.4-201ENST00000541242 TRMT1Q9NXH9 659 aaKnown RBP17.57■□□□□ 0.4
AC005840.4-201ENST00000541242 KCNQ3O43525 872 aa17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 ZNF165P49910 485 aa17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 PROSER2Q86WR7 435 aaPredicted RBP17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 USP44Q9H0E7 712 aa17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 NR1I2O75469 434 aa17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 RBM6P78332 1123 aaKnown RBP17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 ZNF397Q8NF99 534 aaPredicted RBP17.56■□□□□ 0.4
AC005840.4-201ENST00000541242 PHAXQ9H814 394 aaKnown RBP17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 TPCN1Q9ULQ1 816 aa17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 AOX1Q06278 1338 aa17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 GOLGA6L4A6NEF3 574 aa17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 EPB41L2O43491 1005 aaKnown RBP17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 CNTROBQ8N137 903 aa17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
AC005840.4-201ENST00000541242 CDK11BP21127 795 aaKnown RBP17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 LRRC8AQ8IWT6 810 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 AXIN2Q9Y2T1 843 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 LMTK3Q96Q04 1460 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 A0A087WWV3 80 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 ZNF530Q6P9A1 599 aaPredicted RBP17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 MPRIPQ6WCQ1 1025 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 SPATA32Q96LK8 384 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
AC005840.4-201ENST00000541242 CACNA1FO60840 1977 aa17.53■□□□□ 0.4
AC005840.4-201ENST00000541242 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms