RNA–Protein interactions for RNA: ENST00000541087.1

MDM1-212, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-212ENST00000541087 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
MDM1-212ENST00000541087 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
MDM1-212ENST00000541087 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
MDM1-212ENST00000541087 HMOX1P09601 288 aa12.93□□□□□ -0.34
MDM1-212ENST00000541087 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
MDM1-212ENST00000541087 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
MDM1-212ENST00000541087 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
MDM1-212ENST00000541087 PGAP2Q9UHJ9 254 aa12.93□□□□□ -0.34
MDM1-212ENST00000541087 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
MDM1-212ENST00000541087 HUNKP57058 714 aa12.92□□□□□ -0.34
MDM1-212ENST00000541087 CTU1Q7Z7A3 348 aaKnown RBP12.92□□□□□ -0.34
MDM1-212ENST00000541087 ZIC5Q96T25 663 aa12.92□□□□□ -0.34
MDM1-212ENST00000541087 FAM177BA6PVY3 158 aa12.91□□□□□ -0.34
MDM1-212ENST00000541087 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
MDM1-212ENST00000541087 PANK3Q9H999 370 aa12.91□□□□□ -0.34
MDM1-212ENST00000541087 PPIP5K2O43314 1243 aa12.9□□□□□ -0.34
MDM1-212ENST00000541087 CRY2Q49AN0 593 aa12.9□□□□□ -0.34
MDM1-212ENST00000541087 RGMBQ6NW40 437 aa12.9□□□□□ -0.34
MDM1-212ENST00000541087 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
MDM1-212ENST00000541087 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
MDM1-212ENST00000541087 CDHR2Q9BYE9 1310 aa12.89□□□□□ -0.35
MDM1-212ENST00000541087 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
MDM1-212ENST00000541087 TRPA1O75762 1119 aa12.89□□□□□ -0.35
MDM1-212ENST00000541087 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
MDM1-212ENST00000541087 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
MDM1-212ENST00000541087 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
MDM1-212ENST00000541087 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
MDM1-212ENST00000541087 NPC1L1Q9UHC9 1359 aa12.89□□□□□ -0.35
MDM1-212ENST00000541087 FAM155AB1AL88 458 aaPredicted RBP12.88□□□□□ -0.35
MDM1-212ENST00000541087 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
MDM1-212ENST00000541087 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
MDM1-212ENST00000541087 KIF23Q02241 960 aaPredicted RBP12.88□□□□□ -0.35
MDM1-212ENST00000541087 CXCL9Q07325 125 aa12.88□□□□□ -0.35
MDM1-212ENST00000541087 PKN2Q16513 984 aaKnown RBP12.88□□□□□ -0.35
MDM1-212ENST00000541087 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
MDM1-212ENST00000541087 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
MDM1-212ENST00000541087 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
MDM1-212ENST00000541087 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
MDM1-212ENST00000541087 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
MDM1-212ENST00000541087 BTBD11A6QL63 1104 aa12.87□□□□□ -0.35
MDM1-212ENST00000541087 HOXA10P31260 410 aaPredicted RBP12.87□□□□□ -0.35
MDM1-212ENST00000541087 AOC3Q16853 763 aa12.87□□□□□ -0.35
MDM1-212ENST00000541087 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
MDM1-212ENST00000541087 C2orf69Q8N8R5 385 aa12.87□□□□□ -0.35
MDM1-212ENST00000541087 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
MDM1-212ENST00000541087 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
MDM1-212ENST00000541087 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
MDM1-212ENST00000541087 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
MDM1-212ENST00000541087 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
MDM1-212ENST00000541087 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
MDM1-212ENST00000541087 TNIP1Q15025 636 aa12.86□□□□□ -0.35
MDM1-212ENST00000541087 USP48Q86UV5 1035 aa12.86□□□□□ -0.35
MDM1-212ENST00000541087 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
MDM1-212ENST00000541087 SUPT20HQ8NEM7 779 aa12.86□□□□□ -0.35
MDM1-212ENST00000541087 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
MDM1-212ENST00000541087 GBA2Q9HCG7 927 aaPredicted RBP12.86□□□□□ -0.35
MDM1-212ENST00000541087 H7C1D1 291 aa12.85□□□□□ -0.35
MDM1-212ENST00000541087 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
MDM1-212ENST00000541087 SNRPA1P09661 255 aaKnown RBP12.85□□□□□ -0.35
MDM1-212ENST00000541087 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
MDM1-212ENST00000541087 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
MDM1-212ENST00000541087 ABCC12Q96J65 1359 aa12.84□□□□□ -0.35
MDM1-212ENST00000541087 NUP98P52948 1817 aa12.84□□□□□ -0.35
MDM1-212ENST00000541087 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
MDM1-212ENST00000541087 KCNQ3O43525 872 aa12.84□□□□□ -0.35
MDM1-212ENST00000541087 HLFQ16534 295 aa12.84□□□□□ -0.35
MDM1-212ENST00000541087 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
MDM1-212ENST00000541087 TRPM4Q8TD43 1214 aa12.84□□□□□ -0.35
MDM1-212ENST00000541087 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
MDM1-212ENST00000541087 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.36
MDM1-212ENST00000541087 CSRNP1Q96S65 589 aa12.83□□□□□ -0.36
MDM1-212ENST00000541087 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.36
MDM1-212ENST00000541087 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
MDM1-212ENST00000541087 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
MDM1-212ENST00000541087 SLC10A3P09131 477 aa12.82□□□□□ -0.36
MDM1-212ENST00000541087 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
MDM1-212ENST00000541087 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
MDM1-212ENST00000541087 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
MDM1-212ENST00000541087 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
MDM1-212ENST00000541087 MKI67P46013 3256 aaKnown RBP12.82□□□□□ -0.36
MDM1-212ENST00000541087 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
MDM1-212ENST00000541087 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
MDM1-212ENST00000541087 RAD17O75943 681 aa12.81□□□□□ -0.36
MDM1-212ENST00000541087 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
MDM1-212ENST00000541087 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
MDM1-212ENST00000541087 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
MDM1-212ENST00000541087 DPF2Q92785 391 aa12.8□□□□□ -0.36
MDM1-212ENST00000541087 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
MDM1-212ENST00000541087 FBXO46Q6PJ61 603 aaPredicted RBP12.79□□□□□ -0.36
MDM1-212ENST00000541087 DLK2Q6UY11 383 aa12.79□□□□□ -0.36
MDM1-212ENST00000541087 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
MDM1-212ENST00000541087 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
MDM1-212ENST00000541087 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
MDM1-212ENST00000541087 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
MDM1-212ENST00000541087 MPNDQ8N594 471 aa12.78□□□□□ -0.36
MDM1-212ENST00000541087 ZNF296Q8WUU4 475 aaPredicted RBP12.78□□□□□ -0.36
MDM1-212ENST00000541087 U2SURPO15042 1029 aaKnown RBP12.77□□□□□ -0.37
MDM1-212ENST00000541087 BBOX1O75936 387 aa12.77□□□□□ -0.37
MDM1-212ENST00000541087 FXR1P51114 621 aaKnown RBP eCLIP12.77□□□□□ -0.37
MDM1-212ENST00000541087 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms