RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 WWC3Q9ULE0 1092 aa6.59□□□□□ -1.35
SNHG1-214ENST00000540865 QRICH2Q9H0J4 1663 aa6.58□□□□□ -1.36
SNHG1-214ENST00000540865 HTRA3P83110 453 aa6.58□□□□□ -1.36
SNHG1-214ENST00000540865 NME9Q86XW9 330 aa6.58□□□□□ -1.36
SNHG1-214ENST00000540865 KIAA1210Q9ULL0 1709 aa6.58□□□□□ -1.36
SNHG1-214ENST00000540865 CGNL1Q0VF96 1302 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 SSFA2P28290 1259 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 TGFB2P61812 414 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 ARHGAP27Q6ZUM4 889 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 SPIRE2Q8WWL2 714 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 SMARCC1Q92922 1105 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-214ENST00000540865 HLA-CQ95604 372 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 LTV1Q96GA3 475 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-214ENST00000540865 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 NSD3Q9BZ95 1437 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 CICQ96RK0 1608 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-214ENST00000540865 PALLDQ8WX93 1383 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
SNHG1-214ENST00000540865 KDM4AO75164 1064 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 HSPA1AP0DMV8 641 aaKnown RBP6.56□□□□□ -1.36
SNHG1-214ENST00000540865 HSPA1BP0DMV9 641 aaKnown RBP6.56□□□□□ -1.36
SNHG1-214ENST00000540865 NDUFV2P19404 249 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 COPS2P61201 443 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 FUT2Q10981 343 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 PUS10Q3MIT2 529 aaKnown RBP6.56□□□□□ -1.36
SNHG1-214ENST00000540865 HDGFL2Q7Z4V5 671 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-214ENST00000540865 AMIGO3Q86WK7 504 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 NUTM1Q86Y26 1132 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 BCS1LQ9Y276 419 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 PLEKHG2Q9H7P9 1386 aa6.56□□□□□ -1.36
SNHG1-214ENST00000540865 TUBGCP6Q96RT7 1819 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 KDM2BQ8NHM5 1336 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 RGPD5Q99666 1765 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 HOXC9P31274 260 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 GUCA2AQ02747 115 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 C9orf131Q5VYM1 1079 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 SMC1BQ8NDV3 1235 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 POLR3EQ9NVU0 708 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 C10orf71Q711Q0 1435 aa6.55□□□□□ -1.36
SNHG1-214ENST00000540865 PXDNLA1KZ92 1463 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 LY75O60449 1722 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 EDC4Q6P2E9 1401 aaKnown RBP6.54□□□□□ -1.36
SNHG1-214ENST00000540865 A0A0G2JLW4 131 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 MOXD2PA6NHM9 499 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 MMP10P09238 476 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 KMT5BQ4FZB7 885 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 MYSM1Q5VVJ2 828 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 RAPGEF4Q8WZA2 1011 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 MEGF6O75095 1541 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 KAT6BQ8WYB5 2073 aa6.54□□□□□ -1.36
SNHG1-214ENST00000540865 MAP3K19Q56UN5 1328 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 PCDH11XQ9BZA7 1347 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 PCDH11YQ9BZA8 1340 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 POTECB2RU33 542 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 HOXA2O43364 376 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 ACTN4O43707 911 aaKnown RBP6.53□□□□□ -1.36
SNHG1-214ENST00000540865 DPEP1P16444 411 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 TATP17735 454 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-214ENST00000540865 GGCXP38435 758 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 AMPHP49418 695 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 NBPF6Q5VWK0 638 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 SMIM5Q71RC9 77 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 NLGN1Q8N2Q7 840 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 TMC1Q8TDI8 760 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 NECTIN2Q92692 538 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 NBPF4Q96M43 638 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 RRAGCQ9HB90 399 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 CCDC87Q9NVE4 849 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 TERF2IPQ9NYB0 399 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 WDR90Q96KV7 1748 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 CD163L1Q9NR16 1453 aa6.53□□□□□ -1.36
SNHG1-214ENST00000540865 LOC102724428A0A0B4J2F2 783 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 SIK1P57059 783 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 TMF1P82094 1093 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 CSPP1Q1MSJ5 1256 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 PKDCCQ504Y2 493 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 BLOC1S3Q6QNY0 202 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 PROCA1Q8NCQ7 364 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-214ENST00000540865 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 PIGBQ92521 554 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 COG3Q96JB2 828 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 SLC12A5Q9H2X9 1139 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 RNF181Q9P0P0 153 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 LIMD1Q9UGP4 676 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 PCDHB3Q9Y5E6 796 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 USP54Q70EL1 1684 aa6.52□□□□□ -1.37
SNHG1-214ENST00000540865 ZC3H4Q9UPT8 1303 aaKnown RBP6.51□□□□□ -1.37
SNHG1-214ENST00000540865 DOT1LQ8TEK3 1739 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 CYP27B1O15528 508 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 KCNA3P22001 575 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 ATP6V1AP38606 617 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 DALRD3Q5D0E6 543 aaKnown RBP6.51□□□□□ -1.37
SNHG1-214ENST00000540865 MORN1Q5T089 497 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 RIC3Q7Z5B4 369 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 DCAF5Q96JK2 942 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 PUS7Q96PZ0 661 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms