RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ARHGAP45Q92619 1136 aa19.68■□□□□ 0.74
DDB1-218ENST00000540784 FRAT1Q92837 279 aaPredicted RBP19.68■□□□□ 0.74
DDB1-218ENST00000540784 API5Q9BZZ5 524 aaKnown RBP19.68■□□□□ 0.74
DDB1-218ENST00000540784 CWF19L2Q2TBE0 894 aaKnown RBP19.67■□□□□ 0.74
DDB1-218ENST00000540784 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
DDB1-218ENST00000540784 KIF16BQ96L93 1317 aa19.67■□□□□ 0.74
DDB1-218ENST00000540784 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 SLC10A5Q5PT55 438 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 ZBTB38Q8NAP3 1195 aaPredicted RBP19.66■□□□□ 0.74
DDB1-218ENST00000540784 NLGN2Q8NFZ4 835 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 PDZRN3Q9UPQ7 1066 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 SH3TC1Q8TE82 1336 aa19.66■□□□□ 0.74
DDB1-218ENST00000540784 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
DDB1-218ENST00000540784 H0YIN7 160 aa19.65■□□□□ 0.74
DDB1-218ENST00000540784 DPEP1P16444 411 aa19.65■□□□□ 0.74
DDB1-218ENST00000540784 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
DDB1-218ENST00000540784 SYNE4Q8N205 404 aa19.65■□□□□ 0.74
DDB1-218ENST00000540784 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
DDB1-218ENST00000540784 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
DDB1-218ENST00000540784 SRCAPQ6ZRS2 3230 aa19.64■□□□□ 0.73
DDB1-218ENST00000540784 GCKRQ14397 625 aa19.64■□□□□ 0.73
DDB1-218ENST00000540784 RTL5Q5HYW3 569 aaPredicted RBP19.64■□□□□ 0.73
DDB1-218ENST00000540784 ALDH1L1O75891 902 aa19.63■□□□□ 0.73
DDB1-218ENST00000540784 PCCAP05165 728 aaPredicted RBP19.63■□□□□ 0.73
DDB1-218ENST00000540784 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
DDB1-218ENST00000540784 CHRNA5P30532 468 aa19.63■□□□□ 0.73
DDB1-218ENST00000540784 ZKSCAN2Q63HK3 967 aa19.63■□□□□ 0.73
DDB1-218ENST00000540784 JARID2Q92833 1246 aaPredicted RBP19.63■□□□□ 0.73
DDB1-218ENST00000540784 NLRP3Q96P20 1036 aa19.63■□□□□ 0.73
DDB1-218ENST00000540784 ARFGEF2Q9Y6D5 1785 aa19.62■□□□□ 0.73
DDB1-218ENST00000540784 H7C1W4 665 aa19.62■□□□□ 0.73
DDB1-218ENST00000540784 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
DDB1-218ENST00000540784 HCLS1P14317 486 aaPredicted RBP19.62■□□□□ 0.73
DDB1-218ENST00000540784 ATF7IPQ6VMQ6 1270 aa19.62■□□□□ 0.73
DDB1-218ENST00000540784 AFDNP55196 1824 aaKnown RBP19.61■□□□□ 0.73
DDB1-218ENST00000540784 KLRG2A4D1S0 409 aaPredicted RBP19.61■□□□□ 0.73
DDB1-218ENST00000540784 KCNA3P22001 575 aa19.61■□□□□ 0.73
DDB1-218ENST00000540784 CCT4P50991 539 aaKnown RBP19.61■□□□□ 0.73
DDB1-218ENST00000540784 PIM2Q9P1W9 311 aa19.61■□□□□ 0.73
DDB1-218ENST00000540784 NRXN2Q9P2S2 1712 aa19.61■□□□□ 0.73
DDB1-218ENST00000540784 ZNF622Q969S3 477 aaKnown RBP eCLIP19.6■□□□□ 0.734e-6■■□□□ 13.5
DDB1-218ENST00000540784 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
DDB1-218ENST00000540784 ABCC12Q96J65 1359 aa19.59■□□□□ 0.73
DDB1-218ENST00000540784 SRGNP10124 158 aa19.59■□□□□ 0.73
DDB1-218ENST00000540784 TRIM27P14373 513 aa19.59■□□□□ 0.73
DDB1-218ENST00000540784 MASTLQ96GX5 879 aa19.59■□□□□ 0.73
DDB1-218ENST00000540784 ANKRD36CQ5JPF3 1778 aa19.58■□□□□ 0.73
DDB1-218ENST00000540784 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
DDB1-218ENST00000540784 NPR1P16066 1061 aa19.58■□□□□ 0.72
DDB1-218ENST00000540784 STYK1Q6J9G0 422 aa19.58■□□□□ 0.72
DDB1-218ENST00000540784 UBE3BQ7Z3V4 1068 aa19.58■□□□□ 0.72
DDB1-218ENST00000540784 RPGRQ92834 1020 aaKnown RBP19.58■□□□□ 0.72
DDB1-218ENST00000540784 CLUAP1Q96AJ1 413 aa19.58■□□□□ 0.72
DDB1-218ENST00000540784 PXDNLA1KZ92 1463 aa19.57■□□□□ 0.72
DDB1-218ENST00000540784 GRM8O00222 908 aa19.57■□□□□ 0.72
DDB1-218ENST00000540784 PDE8AO60658 829 aa19.57■□□□□ 0.72
DDB1-218ENST00000540784 C3orf67Q6ZVT6 689 aa19.57■□□□□ 0.72
DDB1-218ENST00000540784 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
DDB1-218ENST00000540784 WWC3Q9ULE0 1092 aa19.57■□□□□ 0.72
DDB1-218ENST00000540784 CDHR2Q9BYE9 1310 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 MS4A1P11836 297 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 GPR162Q16538 588 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 CRY2Q49AN0 593 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 DALRD3Q5D0E6 543 aaKnown RBP19.56■□□□□ 0.72
DDB1-218ENST00000540784 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
DDB1-218ENST00000540784 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
DDB1-218ENST00000540784 TTLL6Q8N841 843 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
DDB1-218ENST00000540784 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 RBM17Q96I25 401 aaKnown RBP19.56■□□□□ 0.72
DDB1-218ENST00000540784 TNNQ9UQP3 1299 aa19.56■□□□□ 0.72
DDB1-218ENST00000540784 ALDH1B1P30837 517 aa19.55■□□□□ 0.72
DDB1-218ENST00000540784 HOXA10P31260 410 aaPredicted RBP19.55■□□□□ 0.72
DDB1-218ENST00000540784 CASP7P55210 303 aa19.55■□□□□ 0.72
DDB1-218ENST00000540784 SF3B3Q15393 1217 aaKnown RBP19.55■□□□□ 0.72
DDB1-218ENST00000540784 RIC1Q4ADV7 1423 aa19.55■□□□□ 0.72
DDB1-218ENST00000540784 FTSJ3Q8IY81 847 aaKnown RBP19.55■□□□□ 0.72
DDB1-218ENST00000540784 BCS1LQ9Y276 419 aa19.55■□□□□ 0.72
DDB1-218ENST00000540784 ABCC4O15439 1325 aa19.54■□□□□ 0.72
DDB1-218ENST00000540784 KIF13BQ9NQT8 1826 aa19.54■□□□□ 0.72
DDB1-218ENST00000540784 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
DDB1-218ENST00000540784 PLIN1O60240 522 aa19.53■□□□□ 0.72
DDB1-218ENST00000540784 DDX46Q7L014 1031 aaKnown RBP19.53■□□□□ 0.72
DDB1-218ENST00000540784 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
DDB1-218ENST00000540784 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.72
DDB1-218ENST00000540784 CCDC152Q4G0S7 254 aa19.52■□□□□ 0.72
DDB1-218ENST00000540784 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
DDB1-218ENST00000540784 PLA2G12BQ9BX93 195 aa19.52■□□□□ 0.72
DDB1-218ENST00000540784 UTYO14607 1347 aa19.51■□□□□ 0.71
DDB1-218ENST00000540784 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
DDB1-218ENST00000540784 HDAC5Q9UQL6 1122 aa19.51■□□□□ 0.71
DDB1-218ENST00000540784 ANKRD31Q8N7Z5 1873 aa19.5■□□□□ 0.71
DDB1-218ENST00000540784 GRIN3BO60391 1043 aa19.5■□□□□ 0.71
DDB1-218ENST00000540784 CTSWP56202 376 aa19.5■□□□□ 0.71
DDB1-218ENST00000540784 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
DDB1-218ENST00000540784 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms