RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ERVV-1B6SEH8 477 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 TM4SF1P30408 202 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 NFIXQ14938 502 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 HLFQ16534 295 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 TBC1D9BQ66K14 1250 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 CLEC4GQ6UXB4 293 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 ARXQ96QS3 562 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 ZBTB3Q9H5J0 574 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 HYPKQ9NX55 129 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 ZNF652Q9Y2D9 606 aa8.98□□□□□ -0.97
LPCAT3-209ENST00000540060 MYH3P11055 1940 aa8.97□□□□□ -0.97
LPCAT3-209ENST00000540060 ARFGEF1Q9Y6D6 1849 aa8.97□□□□□ -0.97
LPCAT3-209ENST00000540060 COPS6Q7L5N1 327 aa8.97□□□□□ -0.97
LPCAT3-209ENST00000540060 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
LPCAT3-209ENST00000540060 PHAXQ9H814 394 aaKnown RBP8.97□□□□□ -0.97
LPCAT3-209ENST00000540060 IBTKQ9P2D0 1353 aaPredicted RBP8.97□□□□□ -0.97
LPCAT3-209ENST00000540060 PXDNLA1KZ92 1463 aa8.96□□□□□ -0.97
LPCAT3-209ENST00000540060 TCERG1O14776 1098 aaKnown RBP8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 AIMP1Q12904 312 aaKnown RBP8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 PLBD2Q8NHP8 589 aa8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 FHDC1Q9C0D6 1143 aaPredicted RBP8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 PPP1R1BQ9UD71 204 aaPredicted RBP8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 PARP3Q9Y6F1 533 aa8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 UBN2Q6ZU65 1347 aa8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 ADCY9O60503 1353 aa8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 RIC1Q4ADV7 1423 aa8.96□□□□□ -0.98
LPCAT3-209ENST00000540060 CT47B1P0C2W7 299 aaPredicted RBP8.95□□□□□ -0.98
LPCAT3-209ENST00000540060 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
LPCAT3-209ENST00000540060 BICDL1Q6ZP65 573 aa8.95□□□□□ -0.98
LPCAT3-209ENST00000540060 G2E3Q7L622 706 aa8.95□□□□□ -0.98
LPCAT3-209ENST00000540060 ZNF34Q8IZ26 560 aa8.95□□□□□ -0.98
LPCAT3-209ENST00000540060 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
LPCAT3-209ENST00000540060 SERPINB2P05120 415 aa8.94□□□□□ -0.98
LPCAT3-209ENST00000540060 FLIIQ13045 1269 aa8.94□□□□□ -0.98
LPCAT3-209ENST00000540060 ALDH1L2Q3SY69 923 aa8.94□□□□□ -0.98
LPCAT3-209ENST00000540060 ANKRD13DQ6ZTN6 518 aa8.94□□□□□ -0.98
LPCAT3-209ENST00000540060 SETDB2Q96T68 719 aa8.94□□□□□ -0.98
LPCAT3-209ENST00000540060 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
LPCAT3-209ENST00000540060 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 GPTP24298 496 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 PRR5LQ6MZQ0 368 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 KLHL34Q8N239 644 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 MRPL50Q8N5N7 158 aaKnown RBP8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 CNBD1Q8NA66 436 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 NLGN2Q8NFZ4 835 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 SSH1Q8WYL5 1049 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 SYT17Q9BSW7 474 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 CD2APQ9Y5K6 639 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 SPEF2Q9C093 1822 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 UTRNP46939 3433 aa8.93□□□□□ -0.98
LPCAT3-209ENST00000540060 RNF123Q5XPI4 1314 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 PI4KAP2A4QPH2 592 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 NTSR2O95665 410 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 TCIRG1Q13488 830 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 PARP10Q53GL7 1025 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 KSR2Q6VAB6 950 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 NLRP10Q86W26 655 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 NBPF5PQ86XG9 351 aaPredicted RBP8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 PI4KAP1Q8N8J0 262 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 BCL2L13Q9BXK5 485 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 MAP3K2Q9Y2U5 619 aa8.92□□□□□ -0.98
LPCAT3-209ENST00000540060 TAF1P21675 1872 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 LRRC37AA6NMS7 1700 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 RARSP54136 660 aaKnown RBP8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 ATN1P54259 1190 aaPredicted RBP8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 MS4A3Q96HJ5 214 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 YTHDC1Q96MU7 727 aaKnown RBP8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 METTL22Q9BUU2 404 aaPredicted RBP8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 NYXQ9GZU5 481 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 SMC4Q9NTJ3 1288 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 SLX4Q8IY92 1834 aa8.91□□□□□ -0.98
LPCAT3-209ENST00000540060 PTPRCP08575 1304 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 ATP5J2-PTCD1G3V325 749 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 IGKV5-2P06315 115 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 ST5P78524 1137 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 TRIM28Q13263 835 aaKnown RBP8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 TPTE2Q6XPS3 522 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 PPP1R42Q7Z4L9 355 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 NUTM1Q86Y26 1132 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 DNAAF4Q8WXU2 420 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 MYD88Q99836 296 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 A0A1B0GUL6 1792 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 COL4A1P02462 1669 aa8.9□□□□□ -0.98
LPCAT3-209ENST00000540060 CHD4Q14839 1912 aa8.9□□□□□ -0.99
LPCAT3-209ENST00000540060 FER1L6Q2WGJ9 1857 aa8.89□□□□□ -0.99
LPCAT3-209ENST00000540060 KIF16BQ96L93 1317 aa8.89□□□□□ -0.99
LPCAT3-209ENST00000540060 F6X3S4 739 aa8.89□□□□□ -0.99
LPCAT3-209ENST00000540060 NPHP1O15259 732 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms