RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 AFDNP55196 1824 aaKnown RBP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 CA12O43570 354 aa7.99□□□□□ -1.13
CPSF7-219ENST00000539952 DIAPH1O60610 1272 aaKnown RBP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 A1BGP04217 495 aa7.99□□□□□ -1.13
CPSF7-219ENST00000539952 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 EIF4G2P78344 907 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 USP50Q70EL3 339 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 DZIP3Q86Y13 1208 aaKnown RBP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
CPSF7-219ENST00000539952 GAS2L2Q8NHY3 880 aa7.99□□□□□ -1.13
CPSF7-219ENST00000539952 CAPNS2Q96L46 248 aa7.99□□□□□ -1.13
CPSF7-219ENST00000539952 PSMD1Q99460 953 aa7.99□□□□□ -1.13
CPSF7-219ENST00000539952 FARP1Q9Y4F1 1045 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-219ENST00000539952 ADAMTS7Q9UKP4 1686 aa7.98□□□□□ -1.13
CPSF7-219ENST00000539952 DICER1Q9UPY3 1922 aaKnown RBP7.98□□□□□ -1.13
CPSF7-219ENST00000539952 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-219ENST00000539952 PAXIP1Q6ZW49 1069 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-219ENST00000539952 SCN4AP35499 1836 aa7.98□□□□□ -1.13
CPSF7-219ENST00000539952 RNF123Q5XPI4 1314 aa7.98□□□□□ -1.13
CPSF7-219ENST00000539952 ZNF541Q9H0D2 1346 aa7.98□□□□□ -1.13
CPSF7-219ENST00000539952 BTBD11A6QL63 1104 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
CPSF7-219ENST00000539952 HHIPL1Q96JK4 782 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 NIP7Q9Y221 180 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPSF7-219ENST00000539952 USP16Q9Y5T5 823 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 GJA3Q9Y6H8 435 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 TLL2Q9Y6L7 1015 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 FER1L6Q2WGJ9 1857 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 TJP1Q07157 1748 aa7.97□□□□□ -1.13
CPSF7-219ENST00000539952 PYGBP11216 843 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 EPS15P42566 896 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 GSE1Q14687 1217 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 CST9Q5W186 159 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 CYP4F22Q6NT55 531 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 CFAP44Q96MT7 982 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.14
CPSF7-219ENST00000539952 TMX4Q9H1E5 349 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-219ENST00000539952 TSPYL2Q9H2G4 693 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-219ENST00000539952 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
CPSF7-219ENST00000539952 DLEC1Q9Y238 1755 aa7.95□□□□□ -1.14
CPSF7-219ENST00000539952 HSPA5P11021 654 aaKnown RBP7.95□□□□□ -1.14
CPSF7-219ENST00000539952 GRM1Q13255 1194 aa7.95□□□□□ -1.14
CPSF7-219ENST00000539952 LARGE2Q8N3Y3 721 aa7.95□□□□□ -1.14
CPSF7-219ENST00000539952 NYXQ9GZU5 481 aa7.95□□□□□ -1.14
CPSF7-219ENST00000539952 MRC1P22897 1456 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 SLX4Q8IY92 1834 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 HOXA10P31260 410 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-219ENST00000539952 BRPF1P55201 1214 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-219ENST00000539952 DGKZQ13574 1117 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 SAPCD2Q86UD0 394 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 ZC3H15Q8WU90 426 aaKnown RBP7.94□□□□□ -1.14
CPSF7-219ENST00000539952 FAM212AQ96EL1 285 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 ADARB2Q9NS39 739 aaKnown RBP7.94□□□□□ -1.14
CPSF7-219ENST00000539952 PGAP2Q9UHJ9 254 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 TIAM2Q8IVF5 1701 aa7.94□□□□□ -1.14
CPSF7-219ENST00000539952 FAM177BA6PVY3 158 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 ERVV-1B6SEH8 477 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 U2SURPO15042 1029 aaKnown RBP7.93□□□□□ -1.14
CPSF7-219ENST00000539952 KCNQ3O43525 872 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 AOC2O75106 756 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 CELF2O95319 508 aaKnown RBP7.93□□□□□ -1.14
CPSF7-219ENST00000539952 SCNN1DP51172 638 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 CRY2Q49AN0 593 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 CDC37L1Q7L3B6 337 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 RTF1Q92541 710 aaKnown RBP7.93□□□□□ -1.14
CPSF7-219ENST00000539952 RPGRQ92834 1020 aaKnown RBP7.93□□□□□ -1.14
CPSF7-219ENST00000539952 RBM17Q96I25 401 aaKnown RBP7.93□□□□□ -1.14
CPSF7-219ENST00000539952 CRAMP1Q96RY5 1269 aa7.93□□□□□ -1.14
CPSF7-219ENST00000539952 VIRMAQ69YN4 1812 aaKnown RBP7.93□□□□□ -1.14
CPSF7-219ENST00000539952 TRAF5O00463 557 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 FMR1Q06787 632 aaKnown RBP eCLIP7.92□□□□□ -1.14
CPSF7-219ENST00000539952 NOGQ13253 232 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 NIM1KQ8IY84 436 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 SUPT20HQ8NEM7 779 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 GPRC5DQ9NZD1 345 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 TSKSQ9UJT2 592 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 ANKRD31Q8N7Z5 1873 aa7.92□□□□□ -1.14
CPSF7-219ENST00000539952 NBPF26B4DH59 902 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-219ENST00000539952 HTATSF1O43719 755 aaKnown RBP7.91□□□□□ -1.14
CPSF7-219ENST00000539952 PIP4K2AP48426 406 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-219ENST00000539952 PLCB2Q00722 1185 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 TNIP1Q15025 636 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 HLFQ16534 295 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
CPSF7-219ENST00000539952 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 YTHDC1Q96MU7 727 aaKnown RBP7.91□□□□□ -1.14
CPSF7-219ENST00000539952 ZNRF3Q9ULT6 936 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 NUDCQ9Y266 331 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 CEMIPQ8WUJ3 1361 aa7.91□□□□□ -1.14
CPSF7-219ENST00000539952 H7C1D1 291 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 BBOX1O75936 387 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 CXCL9Q07325 125 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 TAF7Q15545 349 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-219ENST00000539952 CIAPIN1Q6FI81 312 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 CCDC102AQ96A19 550 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms