RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
CACNB1-206ENST00000539338 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
CACNB1-206ENST00000539338 EIF3JO75822 258 aaKnown RBP16.88■□□□□ 0.29
CACNB1-206ENST00000539338 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
CACNB1-206ENST00000539338 CENPHQ9H3R5 247 aa16.88■□□□□ 0.29
CACNB1-206ENST00000539338 PDCL3Q9H2J4 239 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
CACNB1-206ENST00000539338 ANKRD44Q8N8A2 993 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
CACNB1-206ENST00000539338 ERICH4A6NGS2 130 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 TOP1P11387 765 aaKnown RBP16.87■□□□□ 0.29
CACNB1-206ENST00000539338 CCDC144CPQ8IYA2 1237 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
CACNB1-206ENST00000539338 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 IFIT3O14879 490 aaKnown RBP16.86■□□□□ 0.29
CACNB1-206ENST00000539338 EIF6P56537 245 aaKnown RBP16.86■□□□□ 0.29
CACNB1-206ENST00000539338 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 NEK1Q96PY6 1258 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 CHPF2Q9P2E5 772 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 GOLGA6L10A6NI86 522 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
CACNB1-206ENST00000539338 CAVIN4Q5BKX8 364 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 KIF18AQ8NI77 898 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 SEPT11Q9NVA2 429 aaKnown RBP16.86■□□□□ 0.29
CACNB1-206ENST00000539338 CCNL1Q9UK58 526 aaPredicted RBP16.86■□□□□ 0.29
CACNB1-206ENST00000539338 CTAGE5O15320 804 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 TNNT1P13805 278 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 CBX1P83916 185 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 URI1O94763 535 aaPredicted RBP16.86■□□□□ 0.29
CACNB1-206ENST00000539338 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
CACNB1-206ENST00000539338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.86■□□□□ 0.292e-9■■■■■ 223.6
CACNB1-206ENST00000539338 CCDC196A0A1B0GTZ2 297 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
CACNB1-206ENST00000539338 UBE2HP62256 183 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 CNNM3Q8NE01 707 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 PANK2Q9BZ23 570 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 PRDM10Q9NQV6 1147 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 BIN2Q9UBW5 565 aaPredicted RBP16.85■□□□□ 0.29
CACNB1-206ENST00000539338 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
CACNB1-206ENST00000539338 ANKRD18BA2A2Z9 1011 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 ERLIN2O94905 339 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 SYCP2Q9BX26 1530 aa16.85■□□□□ 0.29
CACNB1-206ENST00000539338 KIF2AO00139 706 aaPredicted RBP16.84■□□□□ 0.29
CACNB1-206ENST00000539338 SEC24BO95487 1268 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
CACNB1-206ENST00000539338 TXLNBQ8N3L3 684 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 MKNK2Q9HBH9 465 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 KIAA0556O60303 1618 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 ZSCAN12O43309 604 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 ZNF165P49910 485 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 SSRP1Q08945 709 aaKnown RBP16.84■□□□□ 0.29
CACNB1-206ENST00000539338 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 TMCO3Q6UWJ1 677 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 CTCFLQ8NI51 663 aaPredicted RBP16.84■□□□□ 0.29
CACNB1-206ENST00000539338 CPLX3Q8WVH0 158 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 TMX1Q9H3N1 280 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
CACNB1-206ENST00000539338 SLC5A1P13866 664 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 EYA3Q99504 573 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 CNPY2Q9Y2B0 182 aa16.84■□□□□ 0.29
CACNB1-206ENST00000539338 WDR78Q5VTH9 848 aa16.83■□□□□ 0.29
CACNB1-206ENST00000539338 KRT27Q7Z3Y8 459 aa16.83■□□□□ 0.29
CACNB1-206ENST00000539338 POLKQ9UBT6 870 aa16.83■□□□□ 0.29
CACNB1-206ENST00000539338 MAGI2Q86UL8 1455 aa16.83■□□□□ 0.29
CACNB1-206ENST00000539338 RDXP35241 583 aaKnown RBP16.83■□□□□ 0.29
CACNB1-206ENST00000539338 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.29
CACNB1-206ENST00000539338 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.28
CACNB1-206ENST00000539338 KRT24Q2M2I5 525 aa16.83■□□□□ 0.28
CACNB1-206ENST00000539338 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
CACNB1-206ENST00000539338 MPHOSPH6Q99547 160 aaKnown RBP16.83■□□□□ 0.28
CACNB1-206ENST00000539338 LRRC2Q9BYS8 371 aa16.83■□□□□ 0.28
CACNB1-206ENST00000539338 ZNF76P36508 570 aa16.83■□□□□ 0.28
CACNB1-206ENST00000539338 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
CACNB1-206ENST00000539338 LDHAL6AQ6ZMR3 332 aa16.83■□□□□ 0.28
CACNB1-206ENST00000539338 CRACR2BQ8N4Y2 399 aaPredicted RBP16.83■□□□□ 0.28
CACNB1-206ENST00000539338 BRF1Q92994 677 aa16.83■□□□□ 0.28
CACNB1-206ENST00000539338 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
CACNB1-206ENST00000539338 ORC3Q9UBD5 711 aaPredicted RBP16.83■□□□□ 0.28
CACNB1-206ENST00000539338 DUOX2Q9NRD8 1548 aa16.82■□□□□ 0.28
CACNB1-206ENST00000539338 TMC6Q7Z403 805 aa16.82■□□□□ 0.28
CACNB1-206ENST00000539338 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
CACNB1-206ENST00000539338 STX1AQ16623 288 aa16.82■□□□□ 0.28
CACNB1-206ENST00000539338 MICU3Q86XE3 530 aa16.82■□□□□ 0.28
CACNB1-206ENST00000539338 IQCA1Q86XH1 822 aa16.82■□□□□ 0.28
CACNB1-206ENST00000539338 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
CACNB1-206ENST00000539338 ZNF830Q96NB3 372 aaPredicted RBP16.81■□□□□ 0.28
CACNB1-206ENST00000539338 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
CACNB1-206ENST00000539338 SEC63Q9UGP8 760 aaKnown RBP16.81■□□□□ 0.28
CACNB1-206ENST00000539338 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
CACNB1-206ENST00000539338 PDE6BP35913 854 aa16.81■□□□□ 0.28
CACNB1-206ENST00000539338 VAMP4O75379 141 aa16.81■□□□□ 0.28
CACNB1-206ENST00000539338 DZIP1Q86YF9 867 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms