RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.07
PROM1-219ENST00000539194 DOCK2Q92608 1830 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 ELP1O95163 1332 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 GRM8O00222 908 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 STX6O43752 255 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 PLEKHO1Q53GL0 409 aaPredicted RBP8.37□□□□□ -1.07
PROM1-219ENST00000539194 TPCN1Q9ULQ1 816 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 PA2G4Q9UQ80 394 aaKnown RBP8.37□□□□□ -1.07
PROM1-219ENST00000539194 LRP5O75197 1615 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 NEURL1BA8MQ27 555 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 ZNF530Q6P9A1 599 aaPredicted RBP8.36□□□□□ -1.07
PROM1-219ENST00000539194 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 ZNF609O15014 1411 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 TPM2P07951 284 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 CPA1P15085 419 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 ITGB4P16144 1822 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 CPDO75976 1380 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 MYH3P11055 1940 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 CICQ96RK0 1608 aaPredicted RBP8.36□□□□□ -1.07
PROM1-219ENST00000539194 MYO5AQ9Y4I1 1855 aaKnown RBP8.36□□□□□ -1.07
PROM1-219ENST00000539194 UBE2HP62256 183 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 CWC27Q6UX04 472 aaKnown RBP8.36□□□□□ -1.07
PROM1-219ENST00000539194 ANKLE2Q86XL3 938 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 COPRSQ9NQ92 184 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 SPTLC3Q9NUV7 552 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
PROM1-219ENST00000539194 CASZ1Q86V15 1759 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 RRP9O43818 475 aaKnown RBP8.35□□□□□ -1.07
PROM1-219ENST00000539194 ERC1Q8IUD2 1116 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 LTV1Q96GA3 475 aaPredicted RBP8.35□□□□□ -1.07
PROM1-219ENST00000539194 FAM227BQ96M60 508 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 AGXT2Q9BYV1 514 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 SLC52A2Q9HAB3 445 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 SLC27A2O14975 620 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 CREB3L3Q68CJ9 461 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 ZNF790Q6PG37 636 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 RREB1Q92766 1687 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 A0A1B0GUL6 1792 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 PLCH1Q4KWH8 1693 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
PROM1-219ENST00000539194 GCKRQ14397 625 aa8.35□□□□□ -1.07
PROM1-219ENST00000539194 SH2B1Q9NRF2 756 aaPredicted RBP8.35□□□□□ -1.07
PROM1-219ENST00000539194 PHKG2P15735 406 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 CCDC183Q5T5S1 534 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 ZNF589Q86UQ0 364 aaPredicted RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 TSPY26PQ9H489 355 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 CASTP20810 708 aaKnown RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 GTF2F1P35269 517 aaKnown RBP eCLIP8.34□□□□□ -1.07
PROM1-219ENST00000539194 FAM184AQ8NB25 1140 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 TRIM44Q96DX7 344 aaPredicted RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 SALL1Q9NSC2 1324 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 TAF5LO75529 589 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 NMIQ13287 307 aaPredicted RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 KIAA1211Q6ZU35 1233 aa8.34□□□□□ -1.07
PROM1-219ENST00000539194 ZSCAN31Q96LW9 406 aaPredicted RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 METTL22Q9BUU2 404 aaPredicted RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.34□□□□□ -1.07
PROM1-219ENST00000539194 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
PROM1-219ENST00000539194 RBM8AQ9Y5S9 174 aaKnown RBP8.33□□□□□ -1.08
PROM1-219ENST00000539194 ATP5JP18859 108 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 GJB2P29033 226 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 ESCO1Q5FWF5 840 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 CLASRPQ8N2M8 674 aaKnown RBP8.33□□□□□ -1.08
PROM1-219ENST00000539194 FBXL16Q8N461 479 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 LRP6O75581 1613 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 RBM33Q96EV2 1170 aaKnown RBP8.33□□□□□ -1.08
PROM1-219ENST00000539194 CCDC39Q9UFE4 941 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 DBNLQ9UJU6 430 aaKnown RBP8.33□□□□□ -1.08
PROM1-219ENST00000539194 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
PROM1-219ENST00000539194 BCORQ6W2J9 1755 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
PROM1-219ENST00000539194 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 TNS3Q68CZ2 1445 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 CYP27B1O15528 508 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 FOXO4P98177 505 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 PSME1Q06323 249 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 TEFQ10587 303 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 KCNF1Q9H3M0 494 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 PDRG1Q9NUG6 133 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 CHD4Q14839 1912 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 FOXP2O15409 715 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 LETM1O95202 739 aaPredicted RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
PROM1-219ENST00000539194 LAMB2P55268 1798 aa8.32□□□□□ -1.08
PROM1-219ENST00000539194 DNM1Q05193 864 aaKnown RBP8.31□□□□□ -1.08
PROM1-219ENST00000539194 HIP1O00291 1037 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms