RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 SSH3Q8TE77 659 aa31.42■■■□□ 2.62
KLHL42-202ENST00000539176 COL15A1P39059 1388 aa31.41■■■□□ 2.62
KLHL42-202ENST00000539176 CASP7P55210 303 aa31.41■■■□□ 2.62
KLHL42-202ENST00000539176 POLA2Q14181 598 aa31.41■■■□□ 2.62
KLHL42-202ENST00000539176 CCDC191Q8NCU4 936 aa31.41■■■□□ 2.62
KLHL42-202ENST00000539176 LRRC4BQ9NT99 713 aa31.4■■■□□ 2.62
KLHL42-202ENST00000539176 H7C1W4 665 aa31.39■■■□□ 2.62
KLHL42-202ENST00000539176 SMARCA5O60264 1052 aaPredicted RBP31.39■■■□□ 2.62
KLHL42-202ENST00000539176 ERVV-1B6SEH8 477 aa31.38■■■□□ 2.61
KLHL42-202ENST00000539176 CAMTA2O94983 1202 aa31.38■■■□□ 2.61
KLHL42-202ENST00000539176 HDAC5Q9UQL6 1122 aa31.38■■■□□ 2.61
KLHL42-202ENST00000539176 MTX1Q13505 466 aa31.37■■■□□ 2.61
KLHL42-202ENST00000539176 PLEKHM2Q8IWE5 1019 aa31.37■■■□□ 2.61
KLHL42-202ENST00000539176 C22orf23Q9BZE7 217 aa31.36■■■□□ 2.61
KLHL42-202ENST00000539176 C4BP0C0L5 1744 aa31.36■■■□□ 2.61
KLHL42-202ENST00000539176 GNPATO15228 680 aa31.35■■■□□ 2.61
KLHL42-202ENST00000539176 MFAP1P55081 439 aaKnown RBP31.35■■■□□ 2.61
KLHL42-202ENST00000539176 TRIM28Q13263 835 aaKnown RBP31.35■■■□□ 2.61
KLHL42-202ENST00000539176 RC3H1Q5TC82 1133 aaKnown RBP31.35■■■□□ 2.61
KLHL42-202ENST00000539176 AMIGO3Q86WK7 504 aa31.35■■■□□ 2.61
KLHL42-202ENST00000539176 HSP90AB3PQ58FF7 597 aa31.35■■■□□ 2.61
KLHL42-202ENST00000539176 NLRP10Q86W26 655 aa31.35■■■□□ 2.61
KLHL42-202ENST00000539176 BCORQ6W2J9 1755 aa31.33■■■□□ 2.61
KLHL42-202ENST00000539176 RPS6KA4O75676 772 aa31.33■■■□□ 2.61
KLHL42-202ENST00000539176 SURF6O75683 361 aaKnown RBP31.33■■■□□ 2.61
KLHL42-202ENST00000539176 PA2G4Q9UQ80 394 aaKnown RBP31.33■■■□□ 2.61
KLHL42-202ENST00000539176 UBN2Q6ZU65 1347 aa31.32■■■□□ 2.6
KLHL42-202ENST00000539176 C16orf71Q8IYS4 520 aaPredicted RBP31.32■■■□□ 2.6
KLHL42-202ENST00000539176 SYNE4Q8N205 404 aa31.32■■■□□ 2.6
KLHL42-202ENST00000539176 FAM89AQ96GI7 184 aa31.32■■■□□ 2.6
KLHL42-202ENST00000539176 TTC22Q5TAA0 569 aa31.31■■■□□ 2.6
KLHL42-202ENST00000539176 ZNF34Q8IZ26 560 aa31.31■■■□□ 2.6
KLHL42-202ENST00000539176 CDC45O75419 566 aa31.3■■■□□ 2.6
KLHL42-202ENST00000539176 FOXO4P98177 505 aa31.3■■■□□ 2.6
KLHL42-202ENST00000539176 PCCAP05165 728 aaPredicted RBP31.29■■■□□ 2.6
KLHL42-202ENST00000539176 OTUD7AQ8TE49 926 aaPredicted RBP31.29■■■□□ 2.6
KLHL42-202ENST00000539176 RBM25P49756 843 aaKnown RBP31.28■■■□□ 2.6
KLHL42-202ENST00000539176 RABL6Q3YEC7 729 aaPredicted RBP31.28■■■□□ 2.6
KLHL42-202ENST00000539176 LMBR1LQ6UX01 489 aa31.28■■■□□ 2.6
KLHL42-202ENST00000539176 PROM2Q8N271 834 aa31.28■■■□□ 2.6
KLHL42-202ENST00000539176 KLHDC4Q8TBB5 520 aa31.28■■■□□ 2.6
KLHL42-202ENST00000539176 SRP68Q9UHB9 627 aaKnown RBP31.28■■■□□ 2.6
KLHL42-202ENST00000539176 RTCBQ9Y3I0 505 aaKnown RBP31.28■■■□□ 2.6
KLHL42-202ENST00000539176 APBA3O96018 575 aa31.27■■■□□ 2.6
KLHL42-202ENST00000539176 SLC4A3P48751 1232 aa31.27■■■□□ 2.6
KLHL42-202ENST00000539176 ZBTB38Q8NAP3 1195 aaPredicted RBP31.27■■■□□ 2.6
KLHL42-202ENST00000539176 AK7Q96M32 723 aa31.27■■■□□ 2.6
KLHL42-202ENST00000539176 FAM177BA6PVY3 158 aa31.27■■■□□ 2.6
KLHL42-202ENST00000539176 PHF14O94880 888 aa31.27■■■□□ 2.6
KLHL42-202ENST00000539176 GSPT1P15170 499 aaKnown RBP31.27■■■□□ 2.6
KLHL42-202ENST00000539176 TXNRD1Q16881 649 aa31.26■■■□□ 2.59
KLHL42-202ENST00000539176 TBC1D9Q6ZT07 1266 aa31.26■■■□□ 2.59
KLHL42-202ENST00000539176 LRRCC1Q9C099 1032 aa31.26■■■□□ 2.59
KLHL42-202ENST00000539176 OSBPL3Q9H4L5 887 aa31.26■■■□□ 2.59
KLHL42-202ENST00000539176 SCN7AQ01118 1682 aa31.25■■■□□ 2.59
KLHL42-202ENST00000539176 SLC27A3Q5K4L6 730 aa31.25■■■□□ 2.59
KLHL42-202ENST00000539176 TRMT112Q9UI30 125 aaKnown RBP31.25■■■□□ 2.59
KLHL42-202ENST00000539176 CHMP3Q9Y3E7 222 aa31.25■■■□□ 2.59
KLHL42-202ENST00000539176 SUSD4Q5VX71 490 aa31.25■■■□□ 2.59
KLHL42-202ENST00000539176 TNS1Q9HBL0 1735 aaKnown RBP31.24■■■□□ 2.59
KLHL42-202ENST00000539176 USPL1Q5W0Q7 1092 aa31.24■■■□□ 2.59
KLHL42-202ENST00000539176 ARHGEF1Q92888 912 aaKnown RBP31.24■■■□□ 2.59
KLHL42-202ENST00000539176 NIP7Q9Y221 180 aaKnown RBP eCLIP31.24■■■□□ 2.59
KLHL42-202ENST00000539176 BCL2L12Q9HB09 334 aa31.23■■■□□ 2.59
KLHL42-202ENST00000539176 IL1RAPL2Q9NP60 686 aa31.23■■■□□ 2.59
KLHL42-202ENST00000539176 C4AP0C0L4 1744 aa31.23■■■□□ 2.59
KLHL42-202ENST00000539176 RFX5P48382 616 aaPredicted RBP31.23■■■□□ 2.59
KLHL42-202ENST00000539176 OS9Q13438 667 aaPredicted RBP31.23■■■□□ 2.59
KLHL42-202ENST00000539176 SIL1Q9H173 461 aa31.23■■■□□ 2.59
KLHL42-202ENST00000539176 NBR1Q14596 966 aa31.22■■■□□ 2.59
KLHL42-202ENST00000539176 ZNF652Q9Y2D9 606 aa31.22■■■□□ 2.59
KLHL42-202ENST00000539176 UBR3Q6ZT12 1888 aa31.22■■■□□ 2.59
KLHL42-202ENST00000539176 RHPN1Q8TCX5 695 aa31.21■■■□□ 2.59
KLHL42-202ENST00000539176 NARFQ9UHQ1 456 aa31.21■■■□□ 2.59
KLHL42-202ENST00000539176 RAB11FIP3O75154 756 aa31.21■■■□□ 2.59
KLHL42-202ENST00000539176 CCDC85AQ96PX6 553 aaPredicted RBP31.2■■■□□ 2.58
KLHL42-202ENST00000539176 CDHR2Q9BYE9 1310 aa31.19■■■□□ 2.58
KLHL42-202ENST00000539176 BICDL1Q6ZP65 573 aa31.19■■■□□ 2.58
KLHL42-202ENST00000539176 IRS4O14654 1257 aaPredicted RBP31.18■■■□□ 2.58
KLHL42-202ENST00000539176 PLSCR1O15162 318 aa31.18■■■□□ 2.58
KLHL42-202ENST00000539176 CASC1Q6TDU7 716 aa31.18■■■□□ 2.58
KLHL42-202ENST00000539176 CLEC4GQ6UXB4 293 aa31.18■■■□□ 2.58
KLHL42-202ENST00000539176 ZPR1O75312 459 aa31.18■■■□□ 2.58
KLHL42-202ENST00000539176 PTPN12Q05209 780 aaKnown RBP31.18■■■□□ 2.58
KLHL42-202ENST00000539176 TRAPPC3LQ5T215 181 aa31.18■■■□□ 2.58
KLHL42-202ENST00000539176 TBC1D9BQ66K14 1250 aa31.18■■■□□ 2.58
KLHL42-202ENST00000539176 HSP90AB4PQ58FF6 505 aa31.17■■■□□ 2.58
KLHL42-202ENST00000539176 KIF1BPQ96EK5 621 aa31.17■■■□□ 2.58
KLHL42-202ENST00000539176 UTP14AQ9BVJ6 771 aaKnown RBP31.17■■■□□ 2.58
KLHL42-202ENST00000539176 SALL3Q9BXA9 1300 aa31.17■■■□□ 2.58
KLHL42-202ENST00000539176 PDE1AP54750 535 aa31.16■■■□□ 2.58
KLHL42-202ENST00000539176 PARP10Q53GL7 1025 aa31.16■■■□□ 2.58
KLHL42-202ENST00000539176 PLA2G12BQ9BX93 195 aa31.16■■■□□ 2.58
KLHL42-202ENST00000539176 TBC1D2Q9BYX2 928 aa31.16■■■□□ 2.58
KLHL42-202ENST00000539176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.16■■■□□ 2.58
KLHL42-202ENST00000539176 G3BP1Q13283 466 aaKnown RBP eCLIP31.16■■■□□ 2.58
KLHL42-202ENST00000539176 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.16■■■□□ 2.58
KLHL42-202ENST00000539176 MYH3P11055 1940 aa31.15■■■□□ 2.58
KLHL42-202ENST00000539176 NTSR2O95665 410 aa31.15■■■□□ 2.58
KLHL42-202ENST00000539176 RFC4P35249 363 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms