RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 GRM8O00222 908 aa12.83□□□□□ -0.36
CLPB-210ENST00000539148 POLD1P28340 1107 aa12.83□□□□□ -0.36
CLPB-210ENST00000539148 GCKRQ14397 625 aa12.83□□□□□ -0.36
CLPB-210ENST00000539148 HLFQ16534 295 aa12.83□□□□□ -0.36
CLPB-210ENST00000539148 NBPF5PQ86XG9 351 aaPredicted RBP12.83□□□□□ -0.36
CLPB-210ENST00000539148 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
CLPB-210ENST00000539148 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
CLPB-210ENST00000539148 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
CLPB-210ENST00000539148 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
CLPB-210ENST00000539148 GPTP24298 496 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 ST5P78524 1137 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 NLRP10Q86W26 655 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
CLPB-210ENST00000539148 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
CLPB-210ENST00000539148 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
CLPB-210ENST00000539148 GNAI2P04899 355 aa12.81□□□□□ -0.36
CLPB-210ENST00000539148 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
CLPB-210ENST00000539148 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
CLPB-210ENST00000539148 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
CLPB-210ENST00000539148 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
CLPB-210ENST00000539148 LAMB2P55268 1798 aa12.81□□□□□ -0.36
CLPB-210ENST00000539148 CASZ1Q86V15 1759 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 NFIXQ14938 502 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 UTYO14607 1347 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
CLPB-210ENST00000539148 H7C1W4 665 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
CLPB-210ENST00000539148 HMMRO75330 724 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 RLBP1P12271 317 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 TM4SF1P30408 202 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 USP44Q9H0E7 712 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
CLPB-210ENST00000539148 SERPINB2P05120 415 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 MMP10P09238 476 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
CLPB-210ENST00000539148 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 RIC1Q4ADV7 1423 aa12.78□□□□□ -0.36
CLPB-210ENST00000539148 IRS4O14654 1257 aaPredicted RBP12.77□□□□□ -0.37
CLPB-210ENST00000539148 PDE8AO60658 829 aa12.77□□□□□ -0.37
CLPB-210ENST00000539148 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
CLPB-210ENST00000539148 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
CLPB-210ENST00000539148 SPON1Q9HCB6 807 aa12.77□□□□□ -0.37
CLPB-210ENST00000539148 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
CLPB-210ENST00000539148 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.37
CLPB-210ENST00000539148 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 NTSR2O95665 410 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 PDE6BP35913 854 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 SLC10A5Q5PT55 438 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 FAM89AQ96GI7 184 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 PLA2G12BQ9BX93 195 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 TNNQ9UQP3 1299 aa12.76□□□□□ -0.37
CLPB-210ENST00000539148 POLRMTO00411 1230 aaKnown RBP12.75□□□□□ -0.37
CLPB-210ENST00000539148 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
CLPB-210ENST00000539148 CCDC152Q4G0S7 254 aa12.75□□□□□ -0.37
CLPB-210ENST00000539148 MEIS3Q99687 375 aa12.75□□□□□ -0.37
CLPB-210ENST00000539148 BRIP1Q9BX63 1249 aa12.75□□□□□ -0.37
CLPB-210ENST00000539148 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
CLPB-210ENST00000539148 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
CLPB-210ENST00000539148 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
CLPB-210ENST00000539148 RWDD1Q9H446 243 aaPredicted RBP12.74□□□□□ -0.37
CLPB-210ENST00000539148 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
CLPB-210ENST00000539148 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
CLPB-210ENST00000539148 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
CLPB-210ENST00000539148 HSP90AB4PQ58FF6 505 aa12.73□□□□□ -0.37
CLPB-210ENST00000539148 RTL5Q5HYW3 569 aaPredicted RBP12.73□□□□□ -0.37
CLPB-210ENST00000539148 PRR5LQ6MZQ0 368 aa12.73□□□□□ -0.37
CLPB-210ENST00000539148 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
CLPB-210ENST00000539148 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
CLPB-210ENST00000539148 CDC5LQ99459 802 aaKnown RBP12.73□□□□□ -0.37
CLPB-210ENST00000539148 TMX4Q9H1E5 349 aaPredicted RBP12.73□□□□□ -0.37
CLPB-210ENST00000539148 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
CLPB-210ENST00000539148 CTSWP56202 376 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 DDR1Q08345 913 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 IFIT5Q13325 482 aaKnown RBP12.72□□□□□ -0.37
CLPB-210ENST00000539148 MTX1Q13505 466 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 ERFEQ4G0M1 354 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 TAF7LQ5H9L4 462 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
CLPB-210ENST00000539148 RTL9Q8NET4 1388 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 ANKRD18BA2A2Z9 1011 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 H0YIN7 160 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 SRGAP3O43295 1099 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 ALDH1B1P30837 517 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 CASP7P55210 303 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms