RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 HMMRO75330 724 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 BICDL1Q6ZP65 573 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 LRP10Q7Z4F1 713 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 FLAD1Q8NFF5 587 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 MEIS3Q99687 375 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 ZBTB40Q9NUA8 1239 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 GRM8O00222 908 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 GCKRQ14397 625 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 HLFQ16534 295 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 RTL5Q5HYW3 569 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 CCDC191Q8NCU4 936 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 NARFQ9UHQ1 456 aa13.32□□□□□ -0.28
TNFRSF1A-211ENST00000538363 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 HSP90B1P14625 803 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 USP44Q9H0E7 712 aa13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-211ENST00000538363 QSER1Q2KHR3 1735 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 ARFGEF2Q9Y6D5 1785 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 IGKV5-2P06315 115 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 SSFA2P28290 1259 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 PARP10Q53GL7 1025 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 CLEC4GQ6UXB4 293 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 PROM2Q8N271 834 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 JARID2Q92833 1246 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 LRRFIP2Q9Y608 721 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
TNFRSF1A-211ENST00000538363 SCN7AQ01118 1682 aa13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 CAMKK2Q96RR4 588 aa13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 UTP14AQ9BVJ6 771 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
TNFRSF1A-211ENST00000538363 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-211ENST00000538363 CENPQQ7L2Z9 268 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-211ENST00000538363 ISCA1Q9BUE6 129 aa13.28□□□□□ -0.28
TNFRSF1A-211ENST00000538363 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
TNFRSF1A-211ENST00000538363 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-211ENST00000538363 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-211ENST00000538363 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ZNF827Q17R98 1081 aa13.27□□□□□ -0.29
TNFRSF1A-211ENST00000538363 NLRP10Q86W26 655 aa13.27□□□□□ -0.29
TNFRSF1A-211ENST00000538363 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1A-211ENST00000538363 NUP98P52948 1817 aa13.27□□□□□ -0.29
TNFRSF1A-211ENST00000538363 H7C1W4 665 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SRGAP3O43295 1099 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 PCCAP05165 728 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ATP8B2P98198 1209 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SLC15A2Q16348 729 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 TAF7LQ5H9L4 462 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 TPTE2Q6XPS3 522 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 CASZ1Q86V15 1759 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ZNF34Q8IZ26 560 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ZBTB38Q8NAP3 1195 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 USP42Q9H9J4 1324 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 APBB1O00213 710 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 RGL2O15211 777 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
TNFRSF1A-211ENST00000538363 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 HDAC1Q13547 482 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 AMIGO3Q86WK7 504 aa13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 GCC1Q96CN9 775 aa13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
TNFRSF1A-211ENST00000538363 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 IGHDP01880 384 aa13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 CCDC57Q2TAC2 916 aa13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-211ENST00000538363 UTYO14607 1347 aa13.22□□□□□ -0.29
TNFRSF1A-211ENST00000538363 PDE8AO60658 829 aa13.22□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ST5P78524 1137 aa13.22□□□□□ -0.29
TNFRSF1A-211ENST00000538363 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
TNFRSF1A-211ENST00000538363 LMBR1LQ6UX01 489 aa13.22□□□□□ -0.29
TNFRSF1A-211ENST00000538363 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-211ENST00000538363 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms