RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
PXN-208ENST00000538144 C4BP0C0L5 1744 aa18.78■□□□□ 0.6
PXN-208ENST00000538144 NLRP10Q86W26 655 aa18.77■□□□□ 0.6
PXN-208ENST00000538144 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.59
PXN-208ENST00000538144 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.59
PXN-208ENST00000538144 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.59
PXN-208ENST00000538144 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
PXN-208ENST00000538144 APBA3O96018 575 aa18.76■□□□□ 0.59
PXN-208ENST00000538144 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
PXN-208ENST00000538144 ZNF34Q8IZ26 560 aa18.76■□□□□ 0.59
PXN-208ENST00000538144 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
PXN-208ENST00000538144 AMIGO3Q86WK7 504 aa18.75■□□□□ 0.59
PXN-208ENST00000538144 FAM89AQ96GI7 184 aa18.75■□□□□ 0.59
PXN-208ENST00000538144 UBN2Q6ZU65 1347 aa18.75■□□□□ 0.59
PXN-208ENST00000538144 PCCAP05165 728 aaPredicted RBP18.74■□□□□ 0.59
PXN-208ENST00000538144 FOXO4P98177 505 aa18.74■□□□□ 0.59
PXN-208ENST00000538144 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
PXN-208ENST00000538144 AK7Q96M32 723 aa18.74■□□□□ 0.59
PXN-208ENST00000538144 TXNRD1Q16881 649 aa18.74■□□□□ 0.59
PXN-208ENST00000538144 PROM2Q8N271 834 aa18.74■□□□□ 0.59
PXN-208ENST00000538144 PA2G4Q9UQ80 394 aaKnown RBP18.74■□□□□ 0.59
PXN-208ENST00000538144 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
PXN-208ENST00000538144 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
PXN-208ENST00000538144 LMBR1LQ6UX01 489 aa18.73■□□□□ 0.59
PXN-208ENST00000538144 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
PXN-208ENST00000538144 SYNE4Q8N205 404 aa18.73■□□□□ 0.59
PXN-208ENST00000538144 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
PXN-208ENST00000538144 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
PXN-208ENST00000538144 PHF14O94880 888 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 ARHGEF1Q92888 912 aaKnown RBP18.72■□□□□ 0.59
PXN-208ENST00000538144 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
PXN-208ENST00000538144 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 PLSCR1O15162 318 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 SUSD4Q5VX71 490 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 SRP68Q9UHB9 627 aaKnown RBP18.72■□□□□ 0.59
PXN-208ENST00000538144 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 NIP7Q9Y221 180 aaKnown RBP eCLIP18.72■□□□□ 0.59
PXN-208ENST00000538144 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
PXN-208ENST00000538144 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
PXN-208ENST00000538144 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
PXN-208ENST00000538144 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
PXN-208ENST00000538144 CLEC4GQ6UXB4 293 aa18.71■□□□□ 0.59
PXN-208ENST00000538144 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.59
PXN-208ENST00000538144 NOP58Q9Y2X3 529 aaKnown RBP18.71■□□□□ 0.59
PXN-208ENST00000538144 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
PXN-208ENST00000538144 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
PXN-208ENST00000538144 ZPR1O75312 459 aa18.7■□□□□ 0.58
PXN-208ENST00000538144 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
PXN-208ENST00000538144 BCL2L12Q9HB09 334 aa18.7■□□□□ 0.58
PXN-208ENST00000538144 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
PXN-208ENST00000538144 SCN7AQ01118 1682 aa18.7■□□□□ 0.58
PXN-208ENST00000538144 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
PXN-208ENST00000538144 OTUD7AQ8TE49 926 aaPredicted RBP18.7■□□□□ 0.58
PXN-208ENST00000538144 CDHR2Q9BYE9 1310 aa18.69■□□□□ 0.58
PXN-208ENST00000538144 RFC4P35249 363 aa18.69■□□□□ 0.58
PXN-208ENST00000538144 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
PXN-208ENST00000538144 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
PXN-208ENST00000538144 RHPN1Q8TCX5 695 aa18.69■□□□□ 0.58
PXN-208ENST00000538144 SIL1Q9H173 461 aa18.69■□□□□ 0.58
PXN-208ENST00000538144 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
PXN-208ENST00000538144 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
PXN-208ENST00000538144 BICDL1Q6ZP65 573 aa18.68■□□□□ 0.58
PXN-208ENST00000538144 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
PXN-208ENST00000538144 UTP14AQ9BVJ6 771 aaKnown RBP18.68■□□□□ 0.58
PXN-208ENST00000538144 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
PXN-208ENST00000538144 MYH3P11055 1940 aa18.68■□□□□ 0.58
PXN-208ENST00000538144 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
PXN-208ENST00000538144 FAM161AQ3B820 660 aa18.67■□□□□ 0.58
PXN-208ENST00000538144 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
PXN-208ENST00000538144 TBC1D9BQ66K14 1250 aa18.67■□□□□ 0.58
PXN-208ENST00000538144 KIF1BPQ96EK5 621 aa18.67■□□□□ 0.58
PXN-208ENST00000538144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.67■□□□□ 0.58
PXN-208ENST00000538144 PTPN12Q05209 780 aaKnown RBP18.67■□□□□ 0.58
PXN-208ENST00000538144 CCDC85AQ96PX6 553 aaPredicted RBP18.67■□□□□ 0.58
PXN-208ENST00000538144 COPRSQ9NQ92 184 aa18.67■□□□□ 0.58
PXN-208ENST00000538144 ILDR1Q86SU0 546 aaPredicted RBP18.66■□□□□ 0.58
PXN-208ENST00000538144 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
PXN-208ENST00000538144 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
PXN-208ENST00000538144 RGL2O15211 777 aa18.65■□□□□ 0.58
PXN-208ENST00000538144 NTSR2O95665 410 aa18.65■□□□□ 0.58
PXN-208ENST00000538144 CSF1RP07333 972 aa18.65■□□□□ 0.58
PXN-208ENST00000538144 ADRA2BP18089 450 aa18.65■□□□□ 0.58
PXN-208ENST00000538144 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
PXN-208ENST00000538144 ERC1Q8IUD2 1116 aa18.65■□□□□ 0.58
PXN-208ENST00000538144 PDE8AO60658 829 aa18.64■□□□□ 0.57
PXN-208ENST00000538144 SASH1O94885 1247 aa18.64■□□□□ 0.57
PXN-208ENST00000538144 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
PXN-208ENST00000538144 HMGB2P26583 209 aaKnown RBP18.64■□□□□ 0.57
PXN-208ENST00000538144 SSFA2P28290 1259 aa18.63■□□□□ 0.57
PXN-208ENST00000538144 CTSWP56202 376 aa18.63■□□□□ 0.57
PXN-208ENST00000538144 CCDC57Q2TAC2 916 aa18.63■□□□□ 0.57
PXN-208ENST00000538144 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
PXN-208ENST00000538144 ZNF594Q96JF6 807 aaPredicted RBP18.63■□□□□ 0.57
PXN-208ENST00000538144 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
PXN-208ENST00000538144 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
PXN-208ENST00000538144 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
PXN-208ENST00000538144 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
PXN-208ENST00000538144 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.62■□□□□ 0.57
PXN-208ENST00000538144 RGPD3A6NKT7 1758 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms