RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.73
UBE3B-208ENST00000538070 NWD1Q149M9 1564 aa10.46□□□□□ -0.74
UBE3B-208ENST00000538070 GPTP24298 496 aa10.46□□□□□ -0.74
UBE3B-208ENST00000538070 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.74
UBE3B-208ENST00000538070 FAM43AQ8N2R8 423 aa10.46□□□□□ -0.74
UBE3B-208ENST00000538070 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 KDM4AO75164 1064 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 PTMAP06454 111 aaKnown RBP10.45□□□□□ -0.74
UBE3B-208ENST00000538070 PTMSP20962 102 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 MCM2P49736 904 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 TMEM63CQ9P1W3 806 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 HSP90AB3PQ58FF7 597 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 RUFY3Q7L099 469 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
UBE3B-208ENST00000538070 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 METTL22Q9BUU2 404 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-208ENST00000538070 TAF6LQ9Y6J9 622 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 RAD50Q92878 1312 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 RGPD1P0DJD0 1748 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 EVI5LQ96CN4 794 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
UBE3B-208ENST00000538070 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
UBE3B-208ENST00000538070 USP48Q86UV5 1035 aa10.44□□□□□ -0.74
UBE3B-208ENST00000538070 DDX11Q96FC9 970 aa10.44□□□□□ -0.74
UBE3B-208ENST00000538070 RBSNQ9H1K0 784 aa10.44□□□□□ -0.74
UBE3B-208ENST00000538070 GOLIM4O00461 696 aa10.44□□□□□ -0.74
UBE3B-208ENST00000538070 GJB2P29033 226 aa10.44□□□□□ -0.74
UBE3B-208ENST00000538070 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-208ENST00000538070 CEBPZQ03701 1054 aaKnown RBP10.44□□□□□ -0.74
UBE3B-208ENST00000538070 RGPD2P0DJD1 1756 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 NALCNQ8IZF0 1738 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 ANAPC15P60006 121 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 KDM4FA0A1W2PPD8 638 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 CHST3Q7LGC8 479 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 TTC41PQ6P2S7 1318 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 SYT1P21579 422 aa10.43□□□□□ -0.74
UBE3B-208ENST00000538070 DBNLQ9UJU6 430 aaKnown RBP10.43□□□□□ -0.74
UBE3B-208ENST00000538070 LTN1O94822 1766 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 WDR33Q9C0J8 1336 aaKnown RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 ESPNB1AK53 854 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 RAB11FIP4Q86YS3 637 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 XRN1Q8IZH2 1706 aaKnown RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 CCDC171Q6TFL3 1326 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 STX6O43752 255 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 BRD1O95696 1058 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 DNM1Q05193 864 aaKnown RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 SYNE4Q8N205 404 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 FAM89AQ96GI7 184 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 ZNF335Q9H4Z2 1342 aaPredicted RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 CYP2E1P05181 493 aaPredicted RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 LRRC24Q50LG9 513 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 LARP1BQ659C4 914 aaKnown RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
UBE3B-208ENST00000538070 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.42□□□□□ -0.74
UBE3B-208ENST00000538070 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 NBPF14Q5TI25 921 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
UBE3B-208ENST00000538070 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 PUS3Q9BZE2 481 aaKnown RBP10.41□□□□□ -0.74
UBE3B-208ENST00000538070 NFAT5O94916 1531 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 TNNI3KQ59H18 835 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 FPGT-TNNI3KV9GXZ4 949 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 MEGF6O75095 1541 aa10.41□□□□□ -0.74
UBE3B-208ENST00000538070 GOLGA6L4A6NEF3 574 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 SLC27A2O14975 620 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 MSNP26038 577 aaKnown RBP10.4□□□□□ -0.74
UBE3B-208ENST00000538070 PTPN12Q05209 780 aaKnown RBP10.4□□□□□ -0.74
UBE3B-208ENST00000538070 ME3Q16798 604 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 STK11IPQ8N1F8 1099 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 AOX1Q06278 1338 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 ERBB4Q15303 1308 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 HAND2P61296 217 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 RNF20Q5VTR2 975 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 TMOD3Q9NYL9 352 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 CAMK4Q16566 473 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 CWC25Q9NXE8 425 aaPredicted RBP10.4□□□□□ -0.74
UBE3B-208ENST00000538070 ASAP1Q9ULH1 1129 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
UBE3B-208ENST00000538070 KDM6AO15550 1401 aaPredicted RBP10.4□□□□□ -0.75
UBE3B-208ENST00000538070 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 ZSCAN22P10073 491 aaPredicted RBP10.39□□□□□ -0.75
UBE3B-208ENST00000538070 CCT2P78371 535 aaKnown RBP10.39□□□□□ -0.75
UBE3B-208ENST00000538070 GUCY1B3Q02153 619 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 CUL4AQ13619 759 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 MTX1Q13505 466 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 DNAJC10Q8IXB1 793 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 IL2RBP14784 551 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 GIMAP6Q6P9H5 292 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 BTG4Q9NY30 223 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 SPATA31A3Q5VYP0 1347 aa10.39□□□□□ -0.75
UBE3B-208ENST00000538070 CCDC57Q2TAC2 916 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 PLBD2Q8NHP8 589 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms