RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 MTX1Q13505 466 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 LUZP1Q86V48 1076 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 CKAP2LQ8IYA6 745 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
CLPB-209ENST00000538039 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 BICC1Q9H694 974 aaKnown RBP16.85■□□□□ 0.29
CLPB-209ENST00000538039 SPTLC3Q9NUV7 552 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 STK3Q13188 491 aa16.84■□□□□ 0.29
CLPB-209ENST00000538039 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
CLPB-209ENST00000538039 NPHP4O75161 1426 aaPredicted RBP16.84■□□□□ 0.29
CLPB-209ENST00000538039 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
CLPB-209ENST00000538039 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
CLPB-209ENST00000538039 MAP4K1Q92918 833 aa16.84■□□□□ 0.29
CLPB-209ENST00000538039 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
CLPB-209ENST00000538039 NRBP1Q9UHY1 535 aa16.84■□□□□ 0.29
CLPB-209ENST00000538039 EID1Q9Y6B2 187 aa16.84■□□□□ 0.29
CLPB-209ENST00000538039 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.29
CLPB-209ENST00000538039 IP6K1Q92551 441 aa16.83■□□□□ 0.29
CLPB-209ENST00000538039 MRVI1Q9Y6F6 885 aa16.83■□□□□ 0.29
CLPB-209ENST00000538039 KIF13AQ9H1H9 1805 aa16.83■□□□□ 0.28
CLPB-209ENST00000538039 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.28
CLPB-209ENST00000538039 KIAA1524Q8TCG1 905 aa16.83■□□□□ 0.28
CLPB-209ENST00000538039 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
CLPB-209ENST00000538039 LARP1BQ659C4 914 aaKnown RBP16.83■□□□□ 0.28
CLPB-209ENST00000538039 LARP1Q6PKG0 1096 aaKnown RBP16.83■□□□□ 0.28
CLPB-209ENST00000538039 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
CLPB-209ENST00000538039 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
CLPB-209ENST00000538039 LRMPQ12912 555 aa16.82■□□□□ 0.28
CLPB-209ENST00000538039 SLFNL1Q499Z3 407 aa16.82■□□□□ 0.28
CLPB-209ENST00000538039 JAK2O60674 1132 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 PIP4K2AP48426 406 aaPredicted RBP16.81■□□□□ 0.28
CLPB-209ENST00000538039 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 PTGS1P23219 599 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 PDIA6Q15084 440 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 A0A087WWV3 80 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 TEFQ10587 303 aa16.81■□□□□ 0.28
CLPB-209ENST00000538039 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
CLPB-209ENST00000538039 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
CLPB-209ENST00000538039 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
CLPB-209ENST00000538039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
CLPB-209ENST00000538039 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
CLPB-209ENST00000538039 KSR2Q6VAB6 950 aa16.8■□□□□ 0.28
CLPB-209ENST00000538039 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
CLPB-209ENST00000538039 DACT1Q9NYF0 836 aa16.8■□□□□ 0.28
CLPB-209ENST00000538039 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
CLPB-209ENST00000538039 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
CLPB-209ENST00000538039 NFAT5O94916 1531 aa16.79■□□□□ 0.28
CLPB-209ENST00000538039 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
CLPB-209ENST00000538039 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
CLPB-209ENST00000538039 SLC39A6Q13433 755 aa16.79■□□□□ 0.28
CLPB-209ENST00000538039 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
CLPB-209ENST00000538039 BCL2L12Q9HB09 334 aa16.79■□□□□ 0.28
CLPB-209ENST00000538039 AXIN2Q9Y2T1 843 aa16.79■□□□□ 0.28
CLPB-209ENST00000538039 NR1I2O75469 434 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 TYRO3Q06418 890 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 RIOK3O14730 519 aaKnown RBP16.78■□□□□ 0.28
CLPB-209ENST00000538039 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLPB-209ENST00000538039 KCNJ4P48050 445 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 A0A0G2JLW4 131 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 RUFY2Q8WXA3 655 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLPB-209ENST00000538039 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
CLPB-209ENST00000538039 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
CLPB-209ENST00000538039 SLIT1O75093 1534 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 GRM8O00222 908 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 HMGN5P82970 282 aaKnown RBP16.77■□□□□ 0.28
CLPB-209ENST00000538039 ANO6Q4KMQ2 910 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 ZSCAN31Q96LW9 406 aaPredicted RBP16.77■□□□□ 0.28
CLPB-209ENST00000538039 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
CLPB-209ENST00000538039 CBX8Q9HC52 389 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 PHF8Q9UPP1 1060 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.28
CLPB-209ENST00000538039 HOXB7P09629 217 aa16.77■□□□□ 0.27
CLPB-209ENST00000538039 ATP6V1DQ9Y5K8 247 aa16.77■□□□□ 0.27
CLPB-209ENST00000538039 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
CLPB-209ENST00000538039 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
CLPB-209ENST00000538039 NAA30Q147X3 362 aaPredicted RBP16.76■□□□□ 0.27
CLPB-209ENST00000538039 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
CLPB-209ENST00000538039 ZKSCAN1P17029 563 aaPredicted RBP16.76■□□□□ 0.27
CLPB-209ENST00000538039 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
CLPB-209ENST00000538039 FSD1Q9BTV5 496 aa16.76■□□□□ 0.27
CLPB-209ENST00000538039 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 CCDC192P0DO97 292 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 MYL6BP14649 208 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 CBX1P83916 185 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 PRIMPOLQ96LW4 560 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
CLPB-209ENST00000538039 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 TAF5LO75529 589 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 FOSBP53539 338 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 CCDC186Q7Z3E2 898 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
CLPB-209ENST00000538039 KRT85P78386 507 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms