RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
PTPRR-205ENST00000537619 TTC14Q96N46 770 aa11.3□□□□□ -0.6
PTPRR-205ENST00000537619 ARXQ96QS3 562 aa11.3□□□□□ -0.6
PTPRR-205ENST00000537619 COPRSQ9NQ92 184 aa11.3□□□□□ -0.6
PTPRR-205ENST00000537619 A0A087WZG4 1122 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 XRCC6P12956 609 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTPRR-205ENST00000537619 MCM2P49736 904 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 FAM227BQ96M60 508 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 DIAPH3Q9NSV4 1193 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 CPA1P15085 419 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 FOXO4P98177 505 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 EVI5LQ96CN4 794 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
PTPRR-205ENST00000537619 BOLA2Q9H3K6 86 aa11.29□□□□□ -0.6
PTPRR-205ENST00000537619 GOLGA6L3A6NEY3 463 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 H7C1W4 665 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 TFCP2Q12800 502 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
PTPRR-205ENST00000537619 COL9A3Q14050 684 aaPredicted RBP11.28□□□□□ -0.6
PTPRR-205ENST00000537619 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 KCNB2Q92953 911 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 PANK2Q9BZ23 570 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 LMBRD1Q9NUN5 540 aa11.28□□□□□ -0.6
PTPRR-205ENST00000537619 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
PTPRR-205ENST00000537619 A0A0D9SFI3 127 aa11.27□□□□□ -0.6
PTPRR-205ENST00000537619 TNNI3KQ59H18 835 aa11.27□□□□□ -0.6
PTPRR-205ENST00000537619 L1TD1Q5T7N2 865 aaKnown RBP11.27□□□□□ -0.6
PTPRR-205ENST00000537619 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.6
PTPRR-205ENST00000537619 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.6
PTPRR-205ENST00000537619 FPGT-TNNI3KV9GXZ4 949 aa11.27□□□□□ -0.6
PTPRR-205ENST00000537619 DISP2A7MBM2 1401 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 BRD1O95696 1058 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 LMBR1LQ6UX01 489 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
PTPRR-205ENST00000537619 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
PTPRR-205ENST00000537619 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 SNRKQ9NRH2 765 aa11.27□□□□□ -0.61
PTPRR-205ENST00000537619 MED23Q9ULK4 1368 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 CHGBP05060 677 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 PTMSP20962 102 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 AK2P54819 239 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 EVA1CP58658 441 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 PRPF40BQ6NWY9 871 aaKnown RBP11.26□□□□□ -0.61
PTPRR-205ENST00000537619 RUFY2Q8WXA3 655 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
PTPRR-205ENST00000537619 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
PTPRR-205ENST00000537619 LARGE1O95461 756 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 NECTIN1Q15223 517 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 SKOR2Q2VWA4 1001 aaPredicted RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 ATG9AQ7Z3C6 839 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 DBNDD2Q9BQY9 259 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 ASAP1Q9ULH1 1129 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 TAF6LQ9Y6J9 622 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 JCADQ9P266 1359 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 COL16A1Q07092 1604 aaPredicted RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 PIGBQ92521 554 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
PTPRR-205ENST00000537619 RBM8AQ9Y5S9 174 aaKnown RBP11.25□□□□□ -0.61
PTPRR-205ENST00000537619 ATP5JP18859 108 aa11.24□□□□□ -0.61
PTPRR-205ENST00000537619 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
PTPRR-205ENST00000537619 ST3GAL1Q11201 340 aa11.24□□□□□ -0.61
PTPRR-205ENST00000537619 DNAJC10Q8IXB1 793 aa11.24□□□□□ -0.61
PTPRR-205ENST00000537619 FSD1Q9BTV5 496 aa11.24□□□□□ -0.61
PTPRR-205ENST00000537619 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 DTNBO60941 627 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 CREB3L3Q68CJ9 461 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 JAKMIP1Q96N16 626 aaKnown RBP11.23□□□□□ -0.61
PTPRR-205ENST00000537619 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 ATG3Q9NT62 314 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 DDX49Q9Y6V7 483 aaKnown RBP11.23□□□□□ -0.61
PTPRR-205ENST00000537619 ZNF609O15014 1411 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 SLC27A2O14975 620 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 LRRC24Q50LG9 513 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 CCDC191Q8NCU4 936 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
PTPRR-205ENST00000537619 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 GRPEL1Q9HAV7 217 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
PTPRR-205ENST00000537619 CHMP3Q9Y3E7 222 aa11.23□□□□□ -0.61
PTPRR-205ENST00000537619 COL14A1Q05707 1796 aaKnown RBP11.22□□□□□ -0.61
PTPRR-205ENST00000537619 ITGB4P16144 1822 aa11.22□□□□□ -0.61
PTPRR-205ENST00000537619 HIP1O00291 1037 aa11.22□□□□□ -0.61
PTPRR-205ENST00000537619 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
PTPRR-205ENST00000537619 TM6SF1Q9BZW5 370 aa11.22□□□□□ -0.61
PTPRR-205ENST00000537619 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
PTPRR-205ENST00000537619 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms