RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 PPP1R42Q7Z4L9 355 aa19.42■□□□□ 0.7
SRRM4-202ENST00000537597 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
SRRM4-202ENST00000537597 SYNE4Q8N205 404 aa19.42■□□□□ 0.7
SRRM4-202ENST00000537597 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
SRRM4-202ENST00000537597 MAP3K2Q9Y2U5 619 aa19.42■□□□□ 0.7
SRRM4-202ENST00000537597 ATP5J2-PTCD1G3V325 749 aa19.41■□□□□ 0.7
SRRM4-202ENST00000537597 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
SRRM4-202ENST00000537597 NUTM1Q86Y26 1132 aa19.41■□□□□ 0.7
SRRM4-202ENST00000537597 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
SRRM4-202ENST00000537597 UTP14AQ9BVJ6 771 aaKnown RBP19.41■□□□□ 0.7
SRRM4-202ENST00000537597 COL11A2P13942 1736 aaPredicted RBP19.4■□□□□ 0.7
SRRM4-202ENST00000537597 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
SRRM4-202ENST00000537597 ST5P78524 1137 aa19.4■□□□□ 0.7
SRRM4-202ENST00000537597 C3orf67Q6ZVT6 689 aa19.4■□□□□ 0.7
SRRM4-202ENST00000537597 PIM2Q9P1W9 311 aa19.4■□□□□ 0.7
SRRM4-202ENST00000537597 H0YIN7 160 aa19.39■□□□□ 0.69
SRRM4-202ENST00000537597 RARSP54136 660 aaKnown RBP19.39■□□□□ 0.69
SRRM4-202ENST00000537597 STYK1Q6J9G0 422 aa19.39■□□□□ 0.69
SRRM4-202ENST00000537597 C2CD5Q86YS7 1000 aa19.39■□□□□ 0.69
SRRM4-202ENST00000537597 C7orf43Q8WVR3 580 aa19.39■□□□□ 0.69
SRRM4-202ENST00000537597 TNRC6CQ9HCJ0 1690 aaKnown RBP19.39■□□□□ 0.69
SRRM4-202ENST00000537597 BEND3Q5T5X7 828 aa19.38■□□□□ 0.69
SRRM4-202ENST00000537597 DNAAF4Q8WXU2 420 aa19.38■□□□□ 0.69
SRRM4-202ENST00000537597 MYD88Q99836 296 aa19.38■□□□□ 0.69
SRRM4-202ENST00000537597 FAM177BA6PVY3 158 aa19.37■□□□□ 0.69
SRRM4-202ENST00000537597 CASP7P55210 303 aa19.37■□□□□ 0.69
SRRM4-202ENST00000537597 ZBTB38Q8NAP3 1195 aaPredicted RBP19.37■□□□□ 0.69
SRRM4-202ENST00000537597 MASTLQ96GX5 879 aa19.37■□□□□ 0.69
SRRM4-202ENST00000537597 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
SRRM4-202ENST00000537597 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
SRRM4-202ENST00000537597 NEURL1BA8MQ27 555 aa19.36■□□□□ 0.69
SRRM4-202ENST00000537597 H7C1W4 665 aa19.36■□□□□ 0.69
SRRM4-202ENST00000537597 PCCAP05165 728 aaPredicted RBP19.36■□□□□ 0.69
SRRM4-202ENST00000537597 LINS1Q8NG48 757 aa19.36■□□□□ 0.69
SRRM4-202ENST00000537597 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
SRRM4-202ENST00000537597 F6X3S4 739 aa19.35■□□□□ 0.69
SRRM4-202ENST00000537597 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
SRRM4-202ENST00000537597 FKBP5Q13451 457 aaPredicted RBP19.35■□□□□ 0.69
SRRM4-202ENST00000537597 SF3B3Q15393 1217 aaKnown RBP19.35■□□□□ 0.69
SRRM4-202ENST00000537597 DALRD3Q5D0E6 543 aaKnown RBP19.35■□□□□ 0.69
SRRM4-202ENST00000537597 FAM89AQ96GI7 184 aa19.35■□□□□ 0.69
SRRM4-202ENST00000537597 SNED1Q8TER0 1413 aa19.34■□□□□ 0.69
SRRM4-202ENST00000537597 DDX60Q8IY21 1712 aaKnown RBP19.34■□□□□ 0.69
SRRM4-202ENST00000537597 PTPRCP08575 1304 aa19.34■□□□□ 0.69
SRRM4-202ENST00000537597 NPR1P16066 1061 aa19.34■□□□□ 0.69
SRRM4-202ENST00000537597 GCKRQ14397 625 aa19.34■□□□□ 0.69
SRRM4-202ENST00000537597 GPR162Q16538 588 aa19.34■□□□□ 0.69
SRRM4-202ENST00000537597 CWF19L2Q2TBE0 894 aaKnown RBP19.34■□□□□ 0.69
SRRM4-202ENST00000537597 TTLL6Q8N841 843 aa19.34■□□□□ 0.69
SRRM4-202ENST00000537597 CWC25Q9NXE8 425 aaPredicted RBP19.34■□□□□ 0.69
SRRM4-202ENST00000537597 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
SRRM4-202ENST00000537597 SLX4Q8IY92 1834 aa19.33■□□□□ 0.69
SRRM4-202ENST00000537597 CRAMP1Q96RY5 1269 aa19.33■□□□□ 0.68
SRRM4-202ENST00000537597 HCLS1P14317 486 aaPredicted RBP19.32■□□□□ 0.68
SRRM4-202ENST00000537597 CNKSR1Q969H4 720 aa19.32■□□□□ 0.68
SRRM4-202ENST00000537597 NLRP3Q96P20 1036 aa19.32■□□□□ 0.68
SRRM4-202ENST00000537597 BCS1LQ9Y276 419 aa19.32■□□□□ 0.68
SRRM4-202ENST00000537597 LAMB2P55268 1798 aa19.32■□□□□ 0.68
SRRM4-202ENST00000537597 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
SRRM4-202ENST00000537597 ARHGAP45Q92619 1136 aa19.31■□□□□ 0.68
SRRM4-202ENST00000537597 PLA2G12BQ9BX93 195 aa19.31■□□□□ 0.68
SRRM4-202ENST00000537597 UTYO14607 1347 aa19.3■□□□□ 0.68
SRRM4-202ENST00000537597 IRS4O14654 1257 aaPredicted RBP19.3■□□□□ 0.68
SRRM4-202ENST00000537597 BCL2L13Q9BXK5 485 aa19.3■□□□□ 0.68
SRRM4-202ENST00000537597 ALDH1L1O75891 902 aa19.29■□□□□ 0.68
SRRM4-202ENST00000537597 ALDH1B1P30837 517 aa19.29■□□□□ 0.68
SRRM4-202ENST00000537597 PRELPP51888 382 aa19.29■□□□□ 0.68
SRRM4-202ENST00000537597 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
SRRM4-202ENST00000537597 ZNF622Q969S3 477 aaKnown RBP eCLIP19.29■□□□□ 0.68
SRRM4-202ENST00000537597 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
SRRM4-202ENST00000537597 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
SRRM4-202ENST00000537597 BCAR3O75815 825 aa19.28■□□□□ 0.68
SRRM4-202ENST00000537597 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
SRRM4-202ENST00000537597 NOB1Q9ULX3 412 aaKnown RBP19.28■□□□□ 0.68
SRRM4-202ENST00000537597 COL4A1P02462 1669 aa19.27■□□□□ 0.68
SRRM4-202ENST00000537597 CSF1RP07333 972 aa19.27■□□□□ 0.68
SRRM4-202ENST00000537597 JARID2Q92833 1246 aaPredicted RBP19.27■□□□□ 0.68
SRRM4-202ENST00000537597 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
SRRM4-202ENST00000537597 NFKBIEO00221 500 aa19.26■□□□□ 0.67
SRRM4-202ENST00000537597 NPHP1O15259 732 aa19.26■□□□□ 0.67
SRRM4-202ENST00000537597 PDE8AO60658 829 aa19.26■□□□□ 0.67
SRRM4-202ENST00000537597 KAZALD1Q96I82 304 aa19.26■□□□□ 0.67
SRRM4-202ENST00000537597 FER1L6Q2WGJ9 1857 aa19.25■□□□□ 0.67
SRRM4-202ENST00000537597 TTLL11Q8NHH1 800 aa19.25■□□□□ 0.67
SRRM4-202ENST00000537597 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
SRRM4-202ENST00000537597 CHD4Q14839 1912 aa19.25■□□□□ 0.67
SRRM4-202ENST00000537597 ABCC4O15439 1325 aa19.25■□□□□ 0.67
SRRM4-202ENST00000537597 LTBP3Q9NS15 1303 aa19.25■□□□□ 0.67
SRRM4-202ENST00000537597 RTL9Q8NET4 1388 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 C21orf2O43822 256 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 BBOX1O75936 387 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 FOXO4P98177 505 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
SRRM4-202ENST00000537597 SLC51AQ86UW1 340 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
SRRM4-202ENST00000537597 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 USP44Q9H0E7 712 aa19.24■□□□□ 0.67
SRRM4-202ENST00000537597 GRM8O00222 908 aa19.23■□□□□ 0.67
SRRM4-202ENST00000537597 SBF1O95248 1867 aa19.22■□□□□ 0.67
SRRM4-202ENST00000537597 HSP90B1P14625 803 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms