RNA–Protein interactions for RNA: ENST00000537380.1

CIITA-203, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best)

Gene CIITA, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-203ENST00000537380 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 GRM8O00222 908 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
CIITA-203ENST00000537380 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
CIITA-203ENST00000537380 MTX1Q13505 466 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 GIGYF2Q6Y7W6 1299 aaKnown RBP11.77□□□□□ -0.53
CIITA-203ENST00000537380 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CIITA-203ENST00000537380 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
CIITA-203ENST00000537380 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 ATP8B2P98198 1209 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 GCKRQ14397 625 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 NPM2Q86SE8 214 aaKnown RBP11.76□□□□□ -0.53
CIITA-203ENST00000537380 SIRT2Q8IXJ6 389 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
CIITA-203ENST00000537380 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
CIITA-203ENST00000537380 GYS1P13807 737 aa11.75□□□□□ -0.53
CIITA-203ENST00000537380 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
CIITA-203ENST00000537380 DCTPP1Q9H773 170 aa11.75□□□□□ -0.53
CIITA-203ENST00000537380 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
CIITA-203ENST00000537380 H7C1W4 665 aa11.74□□□□□ -0.53
CIITA-203ENST00000537380 RFC4P35249 363 aa11.74□□□□□ -0.53
CIITA-203ENST00000537380 SSH3Q8TE77 659 aa11.74□□□□□ -0.53
CIITA-203ENST00000537380 GOLGB1Q14789 3259 aaKnown RBP11.74□□□□□ -0.53
CIITA-203ENST00000537380 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
CIITA-203ENST00000537380 POLA2Q14181 598 aa11.73□□□□□ -0.53
CIITA-203ENST00000537380 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
CIITA-203ENST00000537380 NLGN1Q8N2Q7 840 aa11.73□□□□□ -0.53
CIITA-203ENST00000537380 MYD88Q99836 296 aa11.73□□□□□ -0.53
CIITA-203ENST00000537380 CWC25Q9NXE8 425 aaPredicted RBP11.73□□□□□ -0.53
CIITA-203ENST00000537380 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
CIITA-203ENST00000537380 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
CIITA-203ENST00000537380 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
CIITA-203ENST00000537380 CASP7P55210 303 aa11.72□□□□□ -0.53
CIITA-203ENST00000537380 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
CIITA-203ENST00000537380 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
CIITA-203ENST00000537380 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
CIITA-203ENST00000537380 LRRFIP2Q9Y608 721 aaKnown RBP11.72□□□□□ -0.53
CIITA-203ENST00000537380 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
CIITA-203ENST00000537380 CHD4Q14839 1912 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 GRIN3BO60391 1043 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 CAMTA2O94983 1202 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 PCCAP05165 728 aaPredicted RBP11.71□□□□□ -0.53
CIITA-203ENST00000537380 MMP10P09238 476 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 HSP90B1P14625 803 aaKnown RBP11.71□□□□□ -0.53
CIITA-203ENST00000537380 NUCB1Q02818 461 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.53
CIITA-203ENST00000537380 PARP10Q53GL7 1025 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 ZNF652Q9Y2D9 606 aa11.71□□□□□ -0.53
CIITA-203ENST00000537380 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
CIITA-203ENST00000537380 NUP98P52948 1817 aa11.71□□□□□ -0.54
CIITA-203ENST00000537380 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
CIITA-203ENST00000537380 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
CIITA-203ENST00000537380 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
CIITA-203ENST00000537380 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
CIITA-203ENST00000537380 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
CIITA-203ENST00000537380 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
CIITA-203ENST00000537380 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
CIITA-203ENST00000537380 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
CIITA-203ENST00000537380 UTRNP46939 3433 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 ZPR1O75312 459 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 TM4SF1P30408 202 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 KAZALD1Q96I82 304 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
CIITA-203ENST00000537380 BRCA1P38398 1863 aaKnown RBP11.68□□□□□ -0.54
CIITA-203ENST00000537380 DDR1Q08345 913 aa11.68□□□□□ -0.54
CIITA-203ENST00000537380 HLFQ16534 295 aa11.68□□□□□ -0.54
CIITA-203ENST00000537380 PPP1R42Q7Z4L9 355 aa11.68□□□□□ -0.54
CIITA-203ENST00000537380 CHD1LQ86WJ1 897 aa11.68□□□□□ -0.54
CIITA-203ENST00000537380 SUCLG2Q96I99 432 aa11.68□□□□□ -0.54
CIITA-203ENST00000537380 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
CIITA-203ENST00000537380 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
CIITA-203ENST00000537380 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
CIITA-203ENST00000537380 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
CIITA-203ENST00000537380 UBE3BQ7Z3V4 1068 aa11.67□□□□□ -0.54
CIITA-203ENST00000537380 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
CIITA-203ENST00000537380 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
CIITA-203ENST00000537380 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
CIITA-203ENST00000537380 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
CIITA-203ENST00000537380 SRGAP3O43295 1099 aa11.66□□□□□ -0.54
CIITA-203ENST00000537380 CSF1RP07333 972 aa11.66□□□□□ -0.54
CIITA-203ENST00000537380 NFIXQ14938 502 aa11.66□□□□□ -0.54
CIITA-203ENST00000537380 ERC1Q8IUD2 1116 aa11.66□□□□□ -0.54
CIITA-203ENST00000537380 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
CIITA-203ENST00000537380 COPRSQ9NQ92 184 aa11.66□□□□□ -0.54
CIITA-203ENST00000537380 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
CIITA-203ENST00000537380 PARP3Q9Y6F1 533 aa11.66□□□□□ -0.54
CIITA-203ENST00000537380 DLEC1Q9Y238 1755 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms